Gene CHU_1189 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_1189 
Symbol 
ID4185344 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp1363397 
End bp1364152 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content39% 
IMG OID638071186 
Producthypothetical protein 
Protein accessionYP_677804 
Protein GI110637597 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.221174 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0187991 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTAGAC AAAAAGGCTT ATTAAAAATT GATGGAACAA TCGGCGGGAT GACATTCCTC 
AGAACCAAAG ACGGGCTTAT CGTTAAAGAA CAATTACCCT CTACCAAAAG TAAATTTGAA
AGTGATCCCA AATTTCAACG GACACGTGAA AACGCACAGG AGTTTGGTAT GGCAGGAACA
TCCGGAAAAA TGCTACGTGA TGCAATCCGC AGTTTTATGA AGAATGCTTC TGATAGCAAA
GTTACAGCCA GACTTACTCA GGTTATGAGC TTTATTCTTA AAGAAGATAA AACAAGCGCA
CGCGGCAGCC GGAATGTCGC AACGGGGATT AAAACAGATA AGGGAAAAGC GTTTCTAAGA
AAATTCAATT TCAATATTGA TGCATTATTG GGAACTATTC TATTTAAGCC TTTAGTGCTA
GATCCAGCAA CGGGTGAAAT TACAATTGAT GACCTATCTC CTCTTAATGA AATTGAAGGT
CCCCAAGGCG CTACCCATGT AACATTAAAA AGCGCGTTTT TAAGCATTGA TTTCGCTACC
GGTAAAGCCG ATGTACAATA CTCTTTACCT GTAAATCTAG AATTAACTGC AGACAGAGGG
ATTTTACAAT TATCGCCTAC TAAAGCGCCT ATAATTACGA CTGACACTAC CGTTATGCAT
TTACTTGCAC TGGAATTTTA TCAGGAAATC AACAATGTAC AATACTCTCT GAAAAATGGG
GCTTATAATT GCCTTGAGAT TGTTCATGTT GAATAA
 
Protein sequence
MARQKGLLKI DGTIGGMTFL RTKDGLIVKE QLPSTKSKFE SDPKFQRTRE NAQEFGMAGT 
SGKMLRDAIR SFMKNASDSK VTARLTQVMS FILKEDKTSA RGSRNVATGI KTDKGKAFLR
KFNFNIDALL GTILFKPLVL DPATGEITID DLSPLNEIEG PQGATHVTLK SAFLSIDFAT
GKADVQYSLP VNLELTADRG ILQLSPTKAP IITTDTTVMH LLALEFYQEI NNVQYSLKNG
AYNCLEIVHV E