Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_1189 |
Symbol | |
ID | 4185344 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 1363397 |
End bp | 1364152 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 638071186 |
Product | hypothetical protein |
Protein accession | YP_677804 |
Protein GI | 110637597 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.221174 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0187991 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTAGAC AAAAAGGCTT ATTAAAAATT GATGGAACAA TCGGCGGGAT GACATTCCTC AGAACCAAAG ACGGGCTTAT CGTTAAAGAA CAATTACCCT CTACCAAAAG TAAATTTGAA AGTGATCCCA AATTTCAACG GACACGTGAA AACGCACAGG AGTTTGGTAT GGCAGGAACA TCCGGAAAAA TGCTACGTGA TGCAATCCGC AGTTTTATGA AGAATGCTTC TGATAGCAAA GTTACAGCCA GACTTACTCA GGTTATGAGC TTTATTCTTA AAGAAGATAA AACAAGCGCA CGCGGCAGCC GGAATGTCGC AACGGGGATT AAAACAGATA AGGGAAAAGC GTTTCTAAGA AAATTCAATT TCAATATTGA TGCATTATTG GGAACTATTC TATTTAAGCC TTTAGTGCTA GATCCAGCAA CGGGTGAAAT TACAATTGAT GACCTATCTC CTCTTAATGA AATTGAAGGT CCCCAAGGCG CTACCCATGT AACATTAAAA AGCGCGTTTT TAAGCATTGA TTTCGCTACC GGTAAAGCCG ATGTACAATA CTCTTTACCT GTAAATCTAG AATTAACTGC AGACAGAGGG ATTTTACAAT TATCGCCTAC TAAAGCGCCT ATAATTACGA CTGACACTAC CGTTATGCAT TTACTTGCAC TGGAATTTTA TCAGGAAATC AACAATGTAC AATACTCTCT GAAAAATGGG GCTTATAATT GCCTTGAGAT TGTTCATGTT GAATAA
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Protein sequence | MARQKGLLKI DGTIGGMTFL RTKDGLIVKE QLPSTKSKFE SDPKFQRTRE NAQEFGMAGT SGKMLRDAIR SFMKNASDSK VTARLTQVMS FILKEDKTSA RGSRNVATGI KTDKGKAFLR KFNFNIDALL GTILFKPLVL DPATGEITID DLSPLNEIEG PQGATHVTLK SAFLSIDFAT GKADVQYSLP VNLELTADRG ILQLSPTKAP IITTDTTVMH LLALEFYQEI NNVQYSLKNG AYNCLEIVHV E
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