Gene CHU_1188 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_1188 
Symbol 
ID4185343 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp1362981 
End bp1363397 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content34% 
IMG OID638071185 
Producthypothetical protein 
Protein accessionYP_677803 
Protein GI110637596 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.0341384 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0173474 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCTAC TATTGGAAAG AAACTATAAA ACAGGATTAC CAACTGATGG CAACCTGTTT 
TATGAAGAAA AACTTATTTG CCAAACTATT GAGTTGCCTT GGCTAAATAA TTCAACTAGT
ATTTCATGTA TACCAGAGGG CAGATATAAA CTGCACAGAT GTTTTAGTAA AAAATTTGAC
TGGCATTTAG GGATAGAAAA TGTTACGAAC AGAAGGTTTA TAACTATACA TCCAGCAAAT
GATGCACTAA AAGAATTACG CGGATGTATT GCGCCTGTTA CTGAAATAAT CCGAACCGGA
ATTGGGTTAG ATTCTAAACA TGCTTTAAAA AAGCTATTGG ATCTAGTTGG CCCCGAGTTT
AAAAAAGGCA ACTCCATTTA TCTAACAATT AAACCTTCAA ATTCTACTTT ATTATGA
 
Protein sequence
MDLLLERNYK TGLPTDGNLF YEEKLICQTI ELPWLNNSTS ISCIPEGRYK LHRCFSKKFD 
WHLGIENVTN RRFITIHPAN DALKELRGCI APVTEIIRTG IGLDSKHALK KLLDLVGPEF
KKGNSIYLTI KPSNSTLL