Gene CHU_1184 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_1184 
Symbol 
ID4183395 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp1359722 
End bp1360360 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content33% 
IMG OID638071181 
Producthypothetical protein 
Protein accessionYP_677799 
Protein GI110637592 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.00583265 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00701069 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAATAATC AAACAGAAAA GGTACTTGAT TTTGATGAAT GCATTACATT TTTAAATAAA 
AAAGGTAAAG AACTTTTCGG ATTAAAATTT TTTATTGATC CCGCAGATTA TGAAGTGGTT
TATAAAATAT TGATCTACAT TATAAAAGAC GAAAGGAATG CGCAACGCCA TAAGATTAGT
TTGGATAAAG GCATCATGCT TTCTGGGCCT GTAGGATGTG GTAAAACAAC ACTCATGAAT
CTTATGAATC ATATAATTCC TGTAGCAAAC AGATACATTG TTCGTTCATG TAGATTAGTG
AGTTATGATT TTATATCACA AGGGTATGAT GCTATTCACA AATACAGCTA TCAGTCATTT
AAGAATAATA AAAAAGTAGT TACACCACAG GCTTGGTGTT TTGATGACTT AGGCACTGAA
AGCAGTCTTA AATACTATGG TAATGAATGC AACGTAATGG CTGAAATTCT GCTCTCACGG
TATGATTTGT TTATAGAAAA AGACATGGTT ACTCATATTA CTACAAATCT AGTAGCAGAA
GAAATCGAAT CGTTTTACGG AGTCCGCGTA AGAAGCCGCA TGCGTGAAAT GTTTAATCTC
ATTTCGTTTG ATAGAAATTC AAAAGATAAA CGTGTATAA
 
Protein sequence
MNNQTEKVLD FDECITFLNK KGKELFGLKF FIDPADYEVV YKILIYIIKD ERNAQRHKIS 
LDKGIMLSGP VGCGKTTLMN LMNHIIPVAN RYIVRSCRLV SYDFISQGYD AIHKYSYQSF
KNNKKVVTPQ AWCFDDLGTE SSLKYYGNEC NVMAEILLSR YDLFIEKDMV THITTNLVAE
EIESFYGVRV RSRMREMFNL ISFDRNSKDK RV