Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_1184 |
Symbol | |
ID | 4183395 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 1359722 |
End bp | 1360360 |
Gene Length | 639 bp |
Protein Length | 212 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 638071181 |
Product | hypothetical protein |
Protein accession | YP_677799 |
Protein GI | 110637592 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.00583265 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00701069 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGAATAATC AAACAGAAAA GGTACTTGAT TTTGATGAAT GCATTACATT TTTAAATAAA AAAGGTAAAG AACTTTTCGG ATTAAAATTT TTTATTGATC CCGCAGATTA TGAAGTGGTT TATAAAATAT TGATCTACAT TATAAAAGAC GAAAGGAATG CGCAACGCCA TAAGATTAGT TTGGATAAAG GCATCATGCT TTCTGGGCCT GTAGGATGTG GTAAAACAAC ACTCATGAAT CTTATGAATC ATATAATTCC TGTAGCAAAC AGATACATTG TTCGTTCATG TAGATTAGTG AGTTATGATT TTATATCACA AGGGTATGAT GCTATTCACA AATACAGCTA TCAGTCATTT AAGAATAATA AAAAAGTAGT TACACCACAG GCTTGGTGTT TTGATGACTT AGGCACTGAA AGCAGTCTTA AATACTATGG TAATGAATGC AACGTAATGG CTGAAATTCT GCTCTCACGG TATGATTTGT TTATAGAAAA AGACATGGTT ACTCATATTA CTACAAATCT AGTAGCAGAA GAAATCGAAT CGTTTTACGG AGTCCGCGTA AGAAGCCGCA TGCGTGAAAT GTTTAATCTC ATTTCGTTTG ATAGAAATTC AAAAGATAAA CGTGTATAA
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Protein sequence | MNNQTEKVLD FDECITFLNK KGKELFGLKF FIDPADYEVV YKILIYIIKD ERNAQRHKIS LDKGIMLSGP VGCGKTTLMN LMNHIIPVAN RYIVRSCRLV SYDFISQGYD AIHKYSYQSF KNNKKVVTPQ AWCFDDLGTE SSLKYYGNEC NVMAEILLSR YDLFIEKDMV THITTNLVAE EIESFYGVRV RSRMREMFNL ISFDRNSKDK RV
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