Gene CHU_1179 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_1179 
Symbol 
ID4183390 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp1356373 
End bp1356759 
Gene Length387 bp 
Protein Length128 aa 
Translation table11 
GC content30% 
IMG OID638071176 
Producthypothetical protein 
Protein accessionYP_677794 
Protein GI110637587 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000871981 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00759771 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGAAACTA CAATGAAATA CAGCAAAGAA GAAATAATAC TATTATTGCT CGCAGATATG 
AAGAGCAGAA GGCTTCTAAT TGGGCTTGAA GCAACAGGTC TGGCAACAGA TGATTTTAAC
TCAAATCTGG CAGATCTCAT TTTTTCAAAA ATTGACTTGC CAAAACAATA TGAAGCACAG
ATGTATAACT GGTATGAAGA TACAGTTTAC ACATTACTTG AAATAGATAT GCATTATTTC
AGAATACATC AGGAATTTTT AGCCCTTAAG TTTTATGATG CCATTCTTGA GAAAAAAAAT
CAATTAATTA ATCAATTACC AGATACATTA GGTACACATT TTTATTCAAT CTTATCTTGG
CTGAAACTTA ATAAATATAA TAATTGA
 
Protein sequence
METTMKYSKE EIILLLLADM KSRRLLIGLE ATGLATDDFN SNLADLIFSK IDLPKQYEAQ 
MYNWYEDTVY TLLEIDMHYF RIHQEFLALK FYDAILEKKN QLINQLPDTL GTHFYSILSW
LKLNKYNN