Gene CHU_1175 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_1175 
Symbol 
ID4183386 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp1353559 
End bp1353999 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content24% 
IMG OID638071172 
Producthypothetical protein 
Protein accessionYP_677790 
Protein GI110637583 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000160196 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0079494 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
TTGAATTACA TAAAAAACAT ATTCACTTAT TTAGGAATCA GTTTTATACT GACAATATTA 
TCTAATGCAT TAGAAAGTGA TTTTTGGGCT AAATTTTTAG ATGGAAATCT TATTGTTATT
CTAATAACTT TATTAGCAAT TAATACTGCA ACGATAAGTC TTATTATATC TAAGATGCAA
GAGATTGCCG AGAAACATAT TATTGATTTT GATGGTGCAA TAAAAGAAGT TAAGAAATCC
TTATATGAGC AAATCATTTT AATAGCATTG GCAATTGTAT TTTTAATATT AAAAGATAGT
TCTGTTATTA AAACAACTTT TAAATATCAT GATGTCGCAT TTAATACAAT TATTGGTAGT
ATTTTTATTA ATTCAATTGA TATTTTAAGG GATACAGGTG TTGCTATTTT TGAAATATTA
AAATTCAATA ATCGTAAGTG A
 
Protein sequence
MNYIKNIFTY LGISFILTIL SNALESDFWA KFLDGNLIVI LITLLAINTA TISLIISKMQ 
EIAEKHIIDF DGAIKEVKKS LYEQIILIAL AIVFLILKDS SVIKTTFKYH DVAFNTIIGS
IFINSIDILR DTGVAIFEIL KFNNRK