Gene CHU_1168 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_1168 
Symbol 
ID4184540 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp1350866 
End bp1351162 
Gene Length297 bp 
Protein Length98 aa 
Translation table11 
GC content45% 
IMG OID638071165 
Producthypothetical protein 
Protein accessionYP_677783 
Protein GI110637576 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.00423622 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00886446 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
TTGCGAATCA CCCGGGCGTC ACCAACCATT TGCATGAAAT TGCCCATTTT TATTATGTTT 
TATCTAATCC GAAACCATTA CTCCTTAACC AGCTTCATCA CGGTAAAGGC TGCATCGTTT
GTTAAGCGCA CAAAATACAT ACCCGGTGGA AAGGCCGATA CATCTGTTGT GGTAAGAGCA
CCGGTTACGG TTTCTTTTTT CAGGGTCATT CCTTCCGGAT TAATAATCTC CAGCTGTGTG
AATACCTGCG TGCCGGTATT TTCAATAGAC ACCGTACCGG TAGCAGGGTT GGGGTAG
 
Protein sequence
MRITRASPTI CMKLPIFIMF YLIRNHYSLT SFITVKAASF VKRTKYIPGG KADTSVVVRA 
PVTVSFFRVI PSGLIISSCV NTCVPVFSID TVPVAGLG