Gene CHU_1165 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_1165 
Symbol 
ID4184537 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp1346186 
End bp1347271 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content42% 
IMG OID638071162 
Producthypothetical protein 
Protein accessionYP_677780 
Protein GI110637573 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.137204 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAATA ACAACCAACC CCTTATCTGG ATTTTACGCT TTATAGTATC TGCGCTGTTT 
ATTTTTTCAG CTATTTCTAA ATTAATTCCG AGTATTGCTG CTTTTGAACA TCAATTGGTT
GTACAGAACA TAACAAATAT CTGCTTTGCG CCTATACTTG CGCGCGTTGT AATTGCGGCA
GAATTCTTCT TAGGGATCGC GTTCCTTCAA AATCATTACT TTAAAAAATT CATTTTGCCG
GCCATGTTCC TTATGCTGCT TGGCTTCTGC ATCCACTTAA GCTACCAGAT CTTTTTACAT
GGAGACAGCG GTAATTGCGG CTGTATGGGC GACCTGATCC CGATGACACC TTCGCAGGCA
TTGATTAAAA ATGTTGTTAC CCTTGGCATA TTGGTTTACA TTTATACAAA AACGCAGGTG
GCTAAAGCAA ATCAACACCG CTACCCGCTT GCCATTCTTC TGGTATGTTT TGGGTTTGTA
TTCTGGAAAT ACCAACCGGA ATGCGGCTGT GACACGGCTG AAATCCTTAC CCCTCCTGCA
CCTGTTATAG AGCGCATCAT TCAGATTGAT ACGGTATATG TAGACAAAAC TACGCTGAAT
AAAAAAGGCA AAACAGGTAC AGAAGTAAAG CCATCGGATA AAAAACCACA GACAGATGCT
GTTGTGTTGC CTCCGGAACC GGCTGTTCCG ACGGTTCAGC GCCGCACATC CATCTTCGCT
CCGTATACAA ACTTCAGTAC CGGCACAACC AATCTGGATG CAGGCAGACA GATTGTATGT
CTGTTTAATG TAGAGTGCGA CCATTGTATG CATACAGCCA AAGAAATCTG TGAGTTAAAC
AAAACCACAA AACTTCCTCC GGTACACATT ATCTTCTGGG GAGAAGAGTC TCAAAAAGAT
GCCTTCTTTA AATTTGCCGG ATGCACGTTC CCGTATGCAT TTGTTGAAGC CACTAAATTC
TTCCGTTTGC TTGATAAAGC GCCTTCTCCG CCACGTATCG TTGTGCTGAA TGAAGGAAAT
ATTGTAGGTG ATTTCTCTTC TGAAACATTT TCAAAAGCTG CTTTAGTTGA CGCAACAAAA
AAATAA
 
Protein sequence
MKNNNQPLIW ILRFIVSALF IFSAISKLIP SIAAFEHQLV VQNITNICFA PILARVVIAA 
EFFLGIAFLQ NHYFKKFILP AMFLMLLGFC IHLSYQIFLH GDSGNCGCMG DLIPMTPSQA
LIKNVVTLGI LVYIYTKTQV AKANQHRYPL AILLVCFGFV FWKYQPECGC DTAEILTPPA
PVIERIIQID TVYVDKTTLN KKGKTGTEVK PSDKKPQTDA VVLPPEPAVP TVQRRTSIFA
PYTNFSTGTT NLDAGRQIVC LFNVECDHCM HTAKEICELN KTTKLPPVHI IFWGEESQKD
AFFKFAGCTF PYAFVEATKF FRLLDKAPSP PRIVVLNEGN IVGDFSSETF SKAALVDATK
K