| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_1164 |
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| Symbol | amiA |
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| ID | 4184536 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 1345408 |
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| End bp | 1346205 |
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| Gene Length | 798 bp |
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| Protein Length | 265 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638071161 |
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| Product | N-acetylmuramoyl-L-alanine amidase I |
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| Protein accession | YP_677779 |
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| Protein GI | 110637572 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0860] N-acetylmuramoyl-L-alanine amidase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.138653 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGACGCAAC AAAAAAATAA TATGTTGTCC AGATCATTTG CATGGTTCTT ATGCATCAGC
CTTTGTTTTT TATCGTTCCA TATAAAAAAC AAAAAAGGAG TTGCCTTAAA AAAAATTGTT
ATTGACGCGG GCCATGGCGG TAAAGACCCG GGCTGCAACG GAAAATATTC CAGGGAAAAA
GATATCACCT TGCAGATTGC GCTTGAGCTG GGCGAACTGA TCAAAACAAA TCTTCCCGAT
ATTGAAGTTA CCTACACCCG CAAAGACGAC CGTTTTATTG AACTGCACGA CCGTGCGGGT
ATTGCCAACA GGATTGATGC CGACCTGTTT ATTTCAATCC ATGTGAATGC GGGCCCCGAG
CAGTTTGCCG GAACAGAAAC GTACTGCATG GGATTGCATA AAACAGAATC GAATATGCAG
GTAGCGCAAC GGGAGAATTC TTCTATTCTC ATGGAAGCAA ACAACCAGGC AAACTACGAT
GGTTTTGATC CCAACAAACC GGAATCGTAC ATCATGTTTT CCCTGTATCA AAGCGCCAAC
TTAAGCAACA GCATGATACT TGCAGAACGC ATTGAAGAAG AATTCAAAAC ATACAACCAA
CGCTACAGCC GAGGTGTTAA GCAGGCAGGT TTTCTGGTGT TATGGAAAAC AACCATGCCG
GCCGTACTTG TGGAAACAGG TTTCTTAACA CACAAAGAAG AAGAAATCTA TCTGAATTCT
GAAAAAGGAA AAACCCACAC GGCGTATGGC ATCTATAGCG CCATCGAAGA TTATAAACTG
CTGATCGAAG CGGAATAA
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| Protein sequence | MTQQKNNMLS RSFAWFLCIS LCFLSFHIKN KKGVALKKIV IDAGHGGKDP GCNGKYSREK
DITLQIALEL GELIKTNLPD IEVTYTRKDD RFIELHDRAG IANRIDADLF ISIHVNAGPE
QFAGTETYCM GLHKTESNMQ VAQRENSSIL MEANNQANYD GFDPNKPESY IMFSLYQSAN
LSNSMILAER IEEEFKTYNQ RYSRGVKQAG FLVLWKTTMP AVLVETGFLT HKEEEIYLNS
EKGKTHTAYG IYSAIEDYKL LIEAE
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