Gene CHU_1163 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_1163 
Symbol 
ID4184535 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp1344674 
End bp1345213 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content46% 
IMG OID638071160 
Productmetal-dependent hydrolase 
Protein accessionYP_677778 
Protein GI110637571 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.239343 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGACA CTGAATTACA CGCATTAAAA TTTCCGATCG GGGAATACCA AAAAACAGTT 
GACCCTTCTG CCGCACAACT TACGGCGTTT ATATCTGACA TACATTTATT TCCGCAACGC
CTGCGGGAAG CTGCAGAAAC ACTGAGTCAG GCGCAGCTTG ATACAACGTA TCGCCCGGGC
GGGTGGACGA TCAGACAGGT GATTCATCAT TGTGCAGATA GTCATATGAA CAGTTTTATT
CGTTTTAAGC TGGCGCTGAC AGAAGACACT CCTACGATCA AACCTTACTG GGAAGACCGC
TGGGCAGAAT GCATTGACAG TAAAATGGCT ATAGAATTCA GCCTGCATAT CTTAGACGGC
TTGCATACCC GGTGGACCGC TTTACTGGAA TCACTTTCAG CCGCTGAATT AAAACGGGAG
TTTAACCATC CGGAACACCA CGCACCATTT AAAATTGATG AATACATCGG CATGTATGCC
TGGCACAGCA ATCACCACCT GGCGCATATC ACAGCATTAA AAAAACGGAA AGGCTGGTAA
 
Protein sequence
MTDTELHALK FPIGEYQKTV DPSAAQLTAF ISDIHLFPQR LREAAETLSQ AQLDTTYRPG 
GWTIRQVIHH CADSHMNSFI RFKLALTEDT PTIKPYWEDR WAECIDSKMA IEFSLHILDG
LHTRWTALLE SLSAAELKRE FNHPEHHAPF KIDEYIGMYA WHSNHHLAHI TALKKRKGW