Gene CHU_1159 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_1159 
Symbol 
ID4184531 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp1338734 
End bp1339744 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content42% 
IMG OID638071156 
Producthypothetical protein 
Protein accessionYP_677774 
Protein GI110637567 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.698693 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGATA AGGCTTTTGC GAACGAAGTG CAGGAACAGC GCATGCTCAA TAACCTGATC 
CTCGAAGCCG AATTAAAAAG TGTGCGAAGC CAGATAGAAA AAGATCTGCT GAACATGCAA
ACGCCTTCGT TCTTCCGCAT GCATTGGCAA TGGATTAGCG CAGGTGCCTT ATGTTTGCTT
GGCTCCTTGT TTTTTATGCT GCCTGGTAAA AAAGATATTC AAACAGTTTC TCTCCAGAAA
TCTGCCGCTT CACATATTGA AAAGGAAAAT AATCCAGATA TTGCACCGGT TGAAAACACG
ACGCAAAAAA CAGCAACAGC TCTGAACCTG CCTGCAAAAA CGGATATAAG CGATATCGTT
ACCCGTACAC AAGCAACTGA CACAGCACAA GCTGGCAGCC TGGTTATTGC TGGTACACCT
GTGATTGTTC CCGTCAATAC AAAAACAGAA CCTGCTCTTG AGACAACAGC AGGTGAAGAA
AATAAAAAAA CAGATTGTTC TTTAACCAAA ATAACATCTG TCATTACTAC GGAGAACAGC
TGCATGAACA CGGAGACAGG CTCGATACAT ATTGATAAGA TCAGCGGCGG AATTGCTCCG
TATACGTACA CACTTAACAA CAAAAAAATT AAAGAGAAAA ATGTTTCTGC ATTGGGTGCC
GGAATCTATG AGGTGAAAAT ATCAGACCGA AACGGATGTT TATCCGAACA GAAAATTTCT
ATCCTTGAAA AAAACTGCAC ACCTGCTATT CAACAGGGAA CGAAATTCAA CATCAATCCG
ATGCTTGGCG AGACATGCTC TATCGCGTTC GATACAGATA AAAAAGGAAG CCTGACCATT
TATAACCGAA GCGGAAAAAT TGTTTACCGC GTTACAAATC CATCCCTTGA TTACATTGAA
TGGAACGGAA GCGATGGTAC CGGAGCACTT GCTGAAGCAG GGCTTTATGT GTATCTTATC
GACTACACGG ATGGGACAAA AGTAACCGGA GAAGTGACTA TTACCAGATA A
 
Protein sequence
MQDKAFANEV QEQRMLNNLI LEAELKSVRS QIEKDLLNMQ TPSFFRMHWQ WISAGALCLL 
GSLFFMLPGK KDIQTVSLQK SAASHIEKEN NPDIAPVENT TQKTATALNL PAKTDISDIV
TRTQATDTAQ AGSLVIAGTP VIVPVNTKTE PALETTAGEE NKKTDCSLTK ITSVITTENS
CMNTETGSIH IDKISGGIAP YTYTLNNKKI KEKNVSALGA GIYEVKISDR NGCLSEQKIS
ILEKNCTPAI QQGTKFNINP MLGETCSIAF DTDKKGSLTI YNRSGKIVYR VTNPSLDYIE
WNGSDGTGAL AEAGLYVYLI DYTDGTKVTG EVTITR