| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_1146 |
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| Symbol | acrB |
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| ID | 4185201 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | + |
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| Start bp | 1318905 |
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| End bp | 1321985 |
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| Gene Length | 3081 bp |
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| Protein Length | 1026 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638071143 |
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| Product | acriflavine resistance protein |
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| Protein accession | YP_677761 |
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| Protein GI | 110637554 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.199335 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTTTAT CAACCATCAG TATAAAAAGA CCGGTATTGA CCATTGTCAT GAATGGAATC
ATTCTGCTTT TCGGATATCT TGGGTATCAG AAATTAGGAA TCCGTGAATT TCCGGTGATT
GATCCACCTG TTGTATCCAT ACGTGTAGGC TATGCCGGCG CAAGTGCTGA AGTTATCGAA
TCGCAGATCA CATATCCGTT AGAGAAAGCA ATCAATGGCA TTGAAGGGGT AAAATCAATC
GCGTCCTCAA GCAGCATCGG ATCAAGCAAT ATCAGTGTGG AGTTTGAGCT GGGCATCGAT
ATGGAGACTG CAACCAATGA TGTACGCGAT AAAGTATCGC AGGCGCAGCG CTCGCTTCCA
CAGGACCTTG ATGGACCGCC TGTAATCAGT AAGAATAATA ATTTGTCAGA ATACATTATT
GCAATGACTG TTACGAATAA ATCGCTGACA GACCTTGAAA TATGTGAATA TGCAGATGAT
GTATTGATTC CCCGGTTACA GACGATTCCT GGTGTCAGTA CGGTACAGTT GATGGGAGAG
AAAAAGTATG CCATGCGTCT TTGGCTTGAT CCCATAAAGC TTGAAGCTTA CGGAGTAACG
CTGCAGGATG TGAAGCAGGC ACTGGATAAA GAAAATGTTG AACTGCCTGC TGGCAGGCTG
GAAGGAAACA GTACAGAACT AACTGTGAAA GCGAATGCAA AATTCAGCAA TGCATATGGC
TTTGATAATA TGATCATCCG GTCAGAGAAT AACAGAGTAG TGCGTTTGCA GGATGTTGGT
TATGCCGAAT TAGGGGCAGA AAATGAACAA AGCAGCTATC GCATCAATGG TGTGCCGAGC
ACCGCTTGTA TTCTGATACC ACAGCCCGGT GCAAACCATG TTGAAATTGC CAAAGAGTTT
TATAAACGGT ATGAACAGCT TAAAACTGAA CTGCCGGCAG AGTATGAATT GAGTATTTCA
AATGACATGA CACGCTTTGT TACCAAGTCT ATTCATGAAG TAATCGAAAC ACTTTTTATA
GCGGTGCTGC TTGTTGTAAT TATTATTTAT CTATTCTTTC GTGACTGGTC TGTTGCATTG
CGTCCATTGA TTGATATACC TGTTTCTCTC ATCGGTACAT TTTTTATCAT GTATCTGTTT
GGTTTTTCTA TTAACATATT AACGCTGCTT GCAATTGTAT TATCAACCGG CTTGGTTGTT
GATGACGGGA TCGTGGTAAC AGAGAATATT TATAAAAAAA TGGAGCTGGG TATGAATCCC
TTTCAGGCGG CTATTGACGG AGCCAACGAA ATTGTATTCG CTGTTATTTC AACTTCTGTA
ACATTGATCG CGATTTTCCT GCCGATTATT TTTATGGAAG GTTTTGTCGG AAAATTATTT
ATGGAGTTTG GTATTGTTGT AGCATCGTCC ATCTTTATTT CAATTTTTGT ATCACTCACC
CTCACACCTA TGTTGAATGC CTGGCTGGTC AAAGATGTTC ATAAGAAGAC TCGTTTCTAT
GAAAAGACCG AACCGTTTTT TGTTGCACTC AATGAATCGT ATCGCAAGTC ATTACAGCAG
TTTATGAAAA AACGCTGGCT GGCTTTTTTT ATTCTGGGTA TTGCCATGGT GCTTACTGTT
TTTGTCTGGA AGGCGCTTCC CGCAGAGATT GCTCCGCTGG AAGACCGCAG TATGATTCGT
ATTACGATTA CAACACCTGA GGGGGCAAGC TTTGAATATA CCGATGATTT CATGCTTCGC
TTTAGTAAAA CAATTATGGA TTCTGTTCCT GAAAAATTCC TTGTACTGAC AATTACCGGT
GCAGGTTTTG GTTCCGGAAG TACAAATGCA GGGCTTTGCC GTATTCCGTT GGTTGACCGT
TCAGAACGGG ACCGAAGCCA GCAGGAAATT ACCGATCAGC TCAATCGTAT CGTTAAAAAA
TTTCCGGAAG CAAAAATTCA GGTCGGGCAG GAGCAGACTA TTAATACAGG GTTCAGAGGG
TTACCCGTTC AATATATTAT TCAGGCTCCC ACATTTGAGA AGCTGCGTGA AGTGCTGCCG
AAGTTTATGG AAGAAGCCCA AAAAAAACCT GCCTTCTCTA TTGTTGATGT AAACCTGAAA
TTCAATCGTC CGGAAGTACA AGTGCTGATT AACCGGGAGA AAGCCCGTAA CGTAGGCGTA
ACAGTGACAG ATATTGCACA GTCGCTGCAG CTGGCCCTAA GCGGACAGCG TCTTGGATTT
TTCAACCGGT CAGGAAAGCA ATATCAGGTA ATTGGCCAGT TCGACCGCAG GAACCGGAAT
GAAACTGTGG ATCTTAAAAA TATCTATGTG CGCAGTAATG CCGGCATTTT AATTTCATTG
GATAATCTTG TTGAACTGCA GGAAGCAAGC AGTCCGCCTC AGTTATTTCG TTACAATCGC
TATATGTCTG CAACTGTTTC CGCAGGGCTC GCATCTGGTT ATACAATAGG CGACGGATTG
AAAGCAATGG ATGAAGTTTC AGATCAATTA CTGGATAAAT CATTTTCGAC TGCATTGCAA
GGACCTTCCC GCGACTTTGT TGAGAGTTCG TCTAATACAT CATCTGTCTT TATTCTGGCC
TTACTGCTGG TGTATATGAT CCTTGCCGCG CAGTTTGAAA GTTTTATTGA TCCCTTTATT
ATTATGTTAA CCGTTCCGCT GGCGATCGGT GGCGGCGTTT TTTCGCTGTG GTATTTCAAC
CAGACAAATA ACCTGTTCAG TCAGATCGGA CTCATTATGC TGATAGGCTT AGTCACAAAA
AACGGAATCC TGATTGTTGA ATTTGCCAAT CAGTTAAAAC AGGAAGGATT GAGTATTGCT
GAATCTGTCG TAGAAGCATC CGTAGCCAGG TTGCGGCCTA TTCTGATGAC CAGTATTGCT
ACAGCCTTAG GCGCATTACC TATTGCCGTT GCATTCGGAG CTGCCTCTAA AAGCCGCACC
GGTATGGGTA TCGTAATTGT AGGCGGTTTA CTTATTTCGT TAGCACTTAC CTTGTATGTA
ATACCTGCGG TATACAGTTA TTTTTCAAGG GCTGCAAAGA AAGACGTTAA CGTACACGAT
AAAGTTAACG TAGTTACTTA G
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| Protein sequence | MSLSTISIKR PVLTIVMNGI ILLFGYLGYQ KLGIREFPVI DPPVVSIRVG YAGASAEVIE
SQITYPLEKA INGIEGVKSI ASSSSIGSSN ISVEFELGID METATNDVRD KVSQAQRSLP
QDLDGPPVIS KNNNLSEYII AMTVTNKSLT DLEICEYADD VLIPRLQTIP GVSTVQLMGE
KKYAMRLWLD PIKLEAYGVT LQDVKQALDK ENVELPAGRL EGNSTELTVK ANAKFSNAYG
FDNMIIRSEN NRVVRLQDVG YAELGAENEQ SSYRINGVPS TACILIPQPG ANHVEIAKEF
YKRYEQLKTE LPAEYELSIS NDMTRFVTKS IHEVIETLFI AVLLVVIIIY LFFRDWSVAL
RPLIDIPVSL IGTFFIMYLF GFSINILTLL AIVLSTGLVV DDGIVVTENI YKKMELGMNP
FQAAIDGANE IVFAVISTSV TLIAIFLPII FMEGFVGKLF MEFGIVVASS IFISIFVSLT
LTPMLNAWLV KDVHKKTRFY EKTEPFFVAL NESYRKSLQQ FMKKRWLAFF ILGIAMVLTV
FVWKALPAEI APLEDRSMIR ITITTPEGAS FEYTDDFMLR FSKTIMDSVP EKFLVLTITG
AGFGSGSTNA GLCRIPLVDR SERDRSQQEI TDQLNRIVKK FPEAKIQVGQ EQTINTGFRG
LPVQYIIQAP TFEKLREVLP KFMEEAQKKP AFSIVDVNLK FNRPEVQVLI NREKARNVGV
TVTDIAQSLQ LALSGQRLGF FNRSGKQYQV IGQFDRRNRN ETVDLKNIYV RSNAGILISL
DNLVELQEAS SPPQLFRYNR YMSATVSAGL ASGYTIGDGL KAMDEVSDQL LDKSFSTALQ
GPSRDFVESS SNTSSVFILA LLLVYMILAA QFESFIDPFI IMLTVPLAIG GGVFSLWYFN
QTNNLFSQIG LIMLIGLVTK NGILIVEFAN QLKQEGLSIA ESVVEASVAR LRPILMTSIA
TALGALPIAV AFGAASKSRT GMGIVIVGGL LISLALTLYV IPAVYSYFSR AAKKDVNVHD
KVNVVT
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