Gene CHU_1142 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_1142 
Symbol 
ID4185197 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp1315095 
End bp1315535 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content32% 
IMG OID638071139 
Producthypothetical protein 
Protein accessionYP_677757 
Protein GI110637550 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.000918675 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTAC ATTGGGGAAA TTACATCGCA ATCTTTTTTA CGTGTTTTGT TGTGTTCATG 
TTTTGGCTCA TATCCAAAAC ATTCAGCATC AATACAGAAT TGGTTAGTGA AGATTATTAC
GATAAAGAAA TTGCCTATCA GCAGAAAATA GATAAACTTT CAAATGTGCG TCGATTAAAC
GCAGCCGTGC AGGTGATACA GACAGAAGAT TCCATTCAAT TTATTTTTCC TGAAGCATAT
GCACATACAG CTGTAACAGG AATAATTAAA TTATACCGGC CGTCGGATAT TTCAAAAGAT
AAGACCTTTT CAATTACACG TATAAATAAC CGGCAAACGT TTTCGAAAAA AGAATTTATA
AAAGGTAATT ATGTTGTACA TGTTGATTGG AAAGGAAATA CAATTCCTTT TTATACAGAA
GAAACGCTAT ATATAAAATA A
 
Protein sequence
MKLHWGNYIA IFFTCFVVFM FWLISKTFSI NTELVSEDYY DKEIAYQQKI DKLSNVRRLN 
AAVQVIQTED SIQFIFPEAY AHTAVTGIIK LYRPSDISKD KTFSITRINN RQTFSKKEFI
KGNYVVHVDW KGNTIPFYTE ETLYIK