| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_1127 |
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| Symbol | |
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| ID | 4186502 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 1298086 |
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| End bp | 1299654 |
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| Gene Length | 1569 bp |
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| Protein Length | 522 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638071124 |
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| Product | phosphodiesterase |
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| Protein accession | YP_677742 |
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| Protein GI | 110637535 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1418] Predicted HD superfamily hydrolase |
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| TIGRFAM ID | [TIGR00277] uncharacterized domain HDIG
[TIGR03319] conserved hypothetical protein YmdA/YtgF |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.23482 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGAAT TAATTATGTA TATTCTTGCC ACCGCGGTTG TATCAATCGG TGTTGGTATT
GTTGCCGGGA AAGCAATTTT CCAGAAAGAT TTTTCAAAAC AGGAAACAGA AGCCAAAGAA
AAAGCAAACC TGATTATCAA AGAAGCTGAA TTAAAAGCGG AAGCAACAAA AAAAGACAAA
CAGCTTGAAG CAAAAGAACA TTTCCTGAAG CTTAAAACAG AGTTTGAAGA AGATTCAAAC
AAAAAGAAAA ACCTGATCAT CCAGAACGAA CAGAAGATCA AGCAACGCGA ACAGACCATT
TCCAAGCAGA TGGAAACCAA TACACGCCGC GAAGCTGAAC TGGATTCATT GCGTGAAAAT
CTTTCTTCTC AGTTGGAGAT TCTGAACAAA CGTAAAGAAG AACTGGAAAA ACTGAGACAT
TCTCAGATCG AAAAATTAGA GAAAATTGCT GGCCTTACGG GTGAAGAAGC GAAAGCGCAA
TTGATGGATA CCATCAAAGA AGAAGCGCGT ACGGAAGCAT CTTCTTATAT TAAACGCATC
ACGGACGAAG CTAAAATGAC GGCTACCAAG GATGCGAAGA AAATTGTTAT TGAAACCTTA
CAGCGTACAG CTACTGAAAA TGCTGTTGAG AACTGCGTAT CGATCTTCAA TATTGAAAGT
GATGACATCA AAGGTAAAAT CATTGGCCGT GAAGGCCGTA ACATCCGTGC GCTTGAAGCT
GCTACCGGTG TAGAGATCAT TGTAGATGAT ACTCCGGAAG CGATCATTAT TTCAGGCTTT
GATCCGGTAC GCAGAGAGGT TGCCCGTTTA TCGCTGCACC GCCTGGTACA GGATGGACGT
ATTCACCCGG CGCGTATTGA AGAGGTTGTT ACAAAAACAG CTAAACACTT AGACGAAGAA
ATTATTGAGA TCGGCGAACG TACCGCTATT GACTTAGGCA TTCATGGTTT ACACCCTGAA
TTGATCCGTC TGGTAGGCCG TATGCGTTTC CGTTCTTCAT ACGGACAGAA CTTATTACAG
CACTCCAGAG AAGTTGCTAA ATTATGTGCA ACAATGGCTT CTGAACTTGG CTTGAATGCT
AAGGTTGCGA AACGTGCCGG CTTGCTGCAT GACATTGGTA AAGTATATCC GGATGAACCT
GAATTGCCGC ACGCCATTTT GGGTATGGAA TTAGCCAAGA AATACAAAGA GTCTGCTGAG
ATCTGCAATG CAATCGGAGC TCACCACGAT GAAATTGAAA TGACGGGTCT TATCTCCCCG
ATCGTTCAGG TATGTGATGC CATCAGCGGT GCTCGCCCTG GTGCACGTCG TGAGGTGATG
GAACAATATA TCAAACGTCT GAAAGATCTT GAGCAGCTTG CACTGTCATT TGATGGTGTA
TTGAAATGTT ACGCAATACA GGCGGGTAGA GAGCTGCGTA TCATGGTTGA TGCAGAAAAC
GTATCGGATG ATAAAGCAGG TATCCTGTCG TTTGATATTG CGCAGAAAAT TGAAAAAGAA
ATGCAGTATC CGGGCCAGAT CAAAGTAACG GTTATCCGTG AAATGCGTGC CGTGAACTTT
GCGAAATAA
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| Protein sequence | MSELIMYILA TAVVSIGVGI VAGKAIFQKD FSKQETEAKE KANLIIKEAE LKAEATKKDK
QLEAKEHFLK LKTEFEEDSN KKKNLIIQNE QKIKQREQTI SKQMETNTRR EAELDSLREN
LSSQLEILNK RKEELEKLRH SQIEKLEKIA GLTGEEAKAQ LMDTIKEEAR TEASSYIKRI
TDEAKMTATK DAKKIVIETL QRTATENAVE NCVSIFNIES DDIKGKIIGR EGRNIRALEA
ATGVEIIVDD TPEAIIISGF DPVRREVARL SLHRLVQDGR IHPARIEEVV TKTAKHLDEE
IIEIGERTAI DLGIHGLHPE LIRLVGRMRF RSSYGQNLLQ HSREVAKLCA TMASELGLNA
KVAKRAGLLH DIGKVYPDEP ELPHAILGME LAKKYKESAE ICNAIGAHHD EIEMTGLISP
IVQVCDAISG ARPGARREVM EQYIKRLKDL EQLALSFDGV LKCYAIQAGR ELRIMVDAEN
VSDDKAGILS FDIAQKIEKE MQYPGQIKVT VIREMRAVNF AK
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