Gene CHU_1124 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_1124 
Symbol 
ID4186499 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp1296385 
End bp1297263 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content38% 
IMG OID638071121 
Producthydrolase/oxidase 
Protein accessionYP_677739 
Protein GI110637532 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.370065 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAACAA AATTTTCAAA GAAGAAACGT ATTCAGCCTG AATCTTTAAA ACGCTATATA 
GCAGAAGTTA AAGGCGGGAT TCAATATGTT GATGAAGGCA AAGGCCCGCC GGTTCTTTTT
ATTCACGGCG CCTTATCGAA TGCAGATACC TGGAGGAAGA TCATTCCGCT GATCAGTAAA
GAATGCAGAT GTATTGCGAT TGACCTGCCT ATTGGCGGAC ATTATTTGCC GGTTGCTGAT
CATGTATGTT TAACACCAAC CGGGATTGCA GAATTGATTC GGGAATTTAT AGAATATCTT
GAACTGGATA ACGTTACTAT TGTTTCGAAT GATACAGGGG GCGCATATGT GCAAGTATTT
GCATCCTTGT TTCCTGGGAA AATTAACAAA CTGATTTTTT CAAATTGTGA AGTGCTGGAT
ATATTTCCTC CTTCAAAATT TAAATACTTA ACATCTGCCG TTAAAATTCC CGGGTTTAAT
TTTATATTAA GCAGGGTTTT TATGTTCAAA AAAATACTGA AAAGTGAGTT GATCATGGGG
TTGTTATCGT TTAAAATAAC AACTGATGAG TTATACCATT TATATCTGCA TAATTTTATT
CAGGATAAAA GGATACGCGC AAACTTTGCA TCGGCTGCAA GAGCATGGTC GCCGGTGTAT
ACGCTTGCCG CTGCTGAAAA ATTAAAAAAC TTTACCAATC CGGTATTGAT TCTTTGGGGC
AATAAAGATG TTGAACTTTT TCCCTTAAAA ATGGGAGAGG CTCTGAAGGG CGTTTTTCCT
GATGCGGTAC TTGTTGAAAT AGATCAGGCA CGCACCTATA TTCAGGAAGA TCAACCGGAA
CAAACAGCAA AATCGATACT CCGGTTTATT GCACAGTAA
 
Protein sequence
MRTKFSKKKR IQPESLKRYI AEVKGGIQYV DEGKGPPVLF IHGALSNADT WRKIIPLISK 
ECRCIAIDLP IGGHYLPVAD HVCLTPTGIA ELIREFIEYL ELDNVTIVSN DTGGAYVQVF
ASLFPGKINK LIFSNCEVLD IFPPSKFKYL TSAVKIPGFN FILSRVFMFK KILKSELIMG
LLSFKITTDE LYHLYLHNFI QDKRIRANFA SAARAWSPVY TLAAAEKLKN FTNPVLILWG
NKDVELFPLK MGEALKGVFP DAVLVEIDQA RTYIQEDQPE QTAKSILRFI AQ