Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_1124 |
Symbol | |
ID | 4186499 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 1296385 |
End bp | 1297263 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 638071121 |
Product | hydrolase/oxidase |
Protein accession | YP_677739 |
Protein GI | 110637532 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.370065 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGAACAA AATTTTCAAA GAAGAAACGT ATTCAGCCTG AATCTTTAAA ACGCTATATA GCAGAAGTTA AAGGCGGGAT TCAATATGTT GATGAAGGCA AAGGCCCGCC GGTTCTTTTT ATTCACGGCG CCTTATCGAA TGCAGATACC TGGAGGAAGA TCATTCCGCT GATCAGTAAA GAATGCAGAT GTATTGCGAT TGACCTGCCT ATTGGCGGAC ATTATTTGCC GGTTGCTGAT CATGTATGTT TAACACCAAC CGGGATTGCA GAATTGATTC GGGAATTTAT AGAATATCTT GAACTGGATA ACGTTACTAT TGTTTCGAAT GATACAGGGG GCGCATATGT GCAAGTATTT GCATCCTTGT TTCCTGGGAA AATTAACAAA CTGATTTTTT CAAATTGTGA AGTGCTGGAT ATATTTCCTC CTTCAAAATT TAAATACTTA ACATCTGCCG TTAAAATTCC CGGGTTTAAT TTTATATTAA GCAGGGTTTT TATGTTCAAA AAAATACTGA AAAGTGAGTT GATCATGGGG TTGTTATCGT TTAAAATAAC AACTGATGAG TTATACCATT TATATCTGCA TAATTTTATT CAGGATAAAA GGATACGCGC AAACTTTGCA TCGGCTGCAA GAGCATGGTC GCCGGTGTAT ACGCTTGCCG CTGCTGAAAA ATTAAAAAAC TTTACCAATC CGGTATTGAT TCTTTGGGGC AATAAAGATG TTGAACTTTT TCCCTTAAAA ATGGGAGAGG CTCTGAAGGG CGTTTTTCCT GATGCGGTAC TTGTTGAAAT AGATCAGGCA CGCACCTATA TTCAGGAAGA TCAACCGGAA CAAACAGCAA AATCGATACT CCGGTTTATT GCACAGTAA
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Protein sequence | MRTKFSKKKR IQPESLKRYI AEVKGGIQYV DEGKGPPVLF IHGALSNADT WRKIIPLISK ECRCIAIDLP IGGHYLPVAD HVCLTPTGIA ELIREFIEYL ELDNVTIVSN DTGGAYVQVF ASLFPGKINK LIFSNCEVLD IFPPSKFKYL TSAVKIPGFN FILSRVFMFK KILKSELIMG LLSFKITTDE LYHLYLHNFI QDKRIRANFA SAARAWSPVY TLAAAEKLKN FTNPVLILWG NKDVELFPLK MGEALKGVFP DAVLVEIDQA RTYIQEDQPE QTAKSILRFI AQ
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