Gene CHU_1121 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_1121 
Symbol 
ID4186496 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp1294418 
End bp1294906 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content36% 
IMG OID638071118 
Producthypothetical protein 
Protein accessionYP_677736 
Protein GI110637529 
COG category[S] Function unknown 
COG ID[COG3832] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.0695467 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCATCTG CCACAACTAA TTCAAAAATT ATACATGCAA CAAGACAGCA TGTGTATGAG 
GCTTTAACGC AAAAAGAAGC ATTGGAATTC TGGCTTGCGC CAGATCAAAT GACTGGCAAG
ATACACGACT TTGATTTATC TGTTGGTGGC GGGTACACTA TGTCGCTTTT TTATACAGAT
AATAGCATAA AGGGCAAGAC ATCGGGGAAT GAAGACAGGT ATACATCAAC ATTTATAGAG
CTGCAACCGT ATGAAAAAGT TGTGCATTCA ATTACTTTTC AATCAGAGAA AAAAGAATTT
GAAGAGGCAA TGATTATGGA AGTGTTTTTA GAAGAAAAAG GAAAAGATGT AACAAATGTG
ACCATTTTTT TTAAAAATAT TCCAGCCGGT ATAACACCTG AAGACAATGA AGCGGGTACA
AAAGAATCAC TGGATAAACT TGCCCGTTAT CTGGAAAATA ATAATCGTTC TGCTTCTGAA
AAGAAATAA
 
Protein sequence
MSSATTNSKI IHATRQHVYE ALTQKEALEF WLAPDQMTGK IHDFDLSVGG GYTMSLFYTD 
NSIKGKTSGN EDRYTSTFIE LQPYEKVVHS ITFQSEKKEF EEAMIMEVFL EEKGKDVTNV
TIFFKNIPAG ITPEDNEAGT KESLDKLARY LENNNRSASE KK