Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_1107 |
Symbol | |
ID | 4187154 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 1283277 |
End bp | 1287185 |
Gene Length | 3909 bp |
Protein Length | 1302 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 638071105 |
Product | endoglucanase |
Protein accession | YP_677723 |
Protein GI | 110637516 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2730] Endoglucanase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.480089 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATATAC GTTCGACTCT GCAAGCCGGG TTAATAACCC TGGCAATGGT CTTTTGCAGC ATGCTTGCTG TAAATGCACA AACGACACCC GTTCAGAAAT ACGGGCAGTT AAAAATTTTC AACGGAAAAG TTTCCGATCA GAACAACAAC CCGGTTGTTT TACGCGGGAT GTCCTTATTC TGGAGCGGGT ATCCGGAAGG AGCACCGTAC TACAATGCAA CTACTGTTAA ATGGCTGCGG GATGACTGGT GTGTGGATGT AGTCCGTGCT GCCATGTCTG TTGAAACAGG ATCTTCCAAC TACGTAAATA ATCCGGCGGC AGAAATGGCT AAGGTGAAAG CCGTTATAGA TGCCTGTATT GCCAATGGCG TATACGTAAT TGTCGATTTT CATACCCATA ATGCCGAAAA CTATAAAAAC CAGGCAAAAA CGTTTTTTAC GGAGATCGCA ACAACGTATG GCAATGTGCC AAACGTTTTA TACGAAACGT TCAACGAACC TATTTATCAA TCTTGGTCAG GTACGATTAA GCCTTACCAC AATGAGTTGA TACAGACCAT CCGTGCAAAA GATCCGGATA ACATCATTAT CTGCGGTACA AGAACATATT CTCAGGAAGT GGATGAAGCG GCAAACGATC CGGTTACAGG AACGAACATT GCGTACACTG TACACTACTA TGCAAATTCA CACCAGGGTT CATTAAGACA AAAAGTTACA AATGCCTTAA ACAAAGGTGT TGCAATTTTC GCTACCGAAT ACGGTACAAC CGATGCTTCC GGTAACGGCG GCTATAACCC GGGCGAATCG CAGACCTGGT GGAATTTCCT TGAAGCAAAT AAAATAAGTT CAGCCAACTG GTCTGTTACA AATAAAAATG AAACTTCTGC GGCATTAAAG CCGGGTACAG GCATCAGCAA CTGGACAACC AACGATCTTA CAGCTTCAGG TGCGCTTGTA CGGGCATATC TGAAGGGTAA ATGTAATGTT ACGGTTACTA CAGGATCTGT TACCGTTGCA TTTGCAGGAA ATAAGATTGT ATATGATGCG GGCGAAACAG TTACTATGAC AGCTACTGCT ACAGTAGCAA ACGGTACAAT CTCAAAAGTG GAATTCTATA GCGGTACAAC GTTATTGAAT TCAGACGCTT CGAGCCCGTA TACATTTTCA ACATCAACGC TTGCATCGGG TGGTCACAGC ATCACTGCAA AATCATATGA TGCAGCAGGC GCTGTAATTG CAATATCTCC GGTATATGTA ATAAGTATTA TTGGTGCGTC AAATGTTGCT ACAACAGGTA TCACCGATCA GTTTGAAAAC ACAGATCAGT TCTCTGAGTT AACAGGCGGT GTAAATGGTG CAAGCTGCGG TACAGCTACA GCGGCAGCAG CGGCAGGTAT CTACTGGTTT GAAGACAGAG ATGCTGCTAC TCCGTTTAAA GCAGAAGCAA CCCGTACAGG TAATGGTACA TTACAATACC TTATTTCACA GCCACAGAAG TCATACAATG TAATTGGCTT TAATTTTGGG GAATATTGCC AGGGAACTAC AAAACAAAAG TATACACTCG ATCTTACACA GAATGCGGTA TTGCAGTTAA CCGTTGCAGC ACCGGCAACC AATACAGCCA CGCTGGACCT GAAGTTTCAG ATGAAAGATG CAGACGGAAC TGTAATTGCT ATCAACAAAA CATTCTTAAC AGAAACAGTT GCTACAAACT GGTATAAATA TGAAATCGGT TTCAGCAAAA ACCATCTTGC ACCCGATTAT TTATCTTTGG CACCCGGCAC AACAACAAAC TTCTCGTTTG ATTTCAAAAA TACGTTATCG ATTAAAAATC CAAACAATCC GAATTTCCCG ACCGATATCA ATCTGAACAA CACGGATTTT GATTTCAGTA AAGTTGTTGA GGTAGTAATT ATTCCGGTAA ATAAACAGGA TACAGGTACT CCTAATTATG ATCCGCTTGC ATTTACAGAC CAGAAAATTA TTTTCTCGGG ATTAAAACTG GGCAATCCGG CGTTAGGGGT TGATATCTGT ACAACACCAA AAGCTGTAAC TACAGCAACC AAATCGTATT GCCAGAATGC AACTAATGCA GTAGCACTTA CAGCAACAGG TACAGCAGGC CTTACATTGA AATGGTATGC TTCAGCAACT GGCGGGGTAG CCAATACGGT TGCACCGATC CCTTCAACAT CTGTTGCCGG TGATCAGACG TATTATGTGA GCCAGGCAGT GCCGGGATCA AGCACATGTG AAGGTCCGCG TACAGAATTA AAAGTTACGA TTGTACCGGC AGCAACTTCT GATGCCGGCC AGGATGTGAC AATCACTTCA GCAACATCTG CAAGTCTAAC TGCTGTGGGT TCTTCAGCGG GAACATGGAG TACATACTCT GTTCCGACAG GAGCAACGGT AACGTTCTCG CCTTCGGCAA CTTCAGCTGC TGTTACGGCT AATGGTTTAA CTGTAAACGG TACGTACGGA TTTGTTTATA CCGTTGCCGG AACAGGTTCA TGCGCATCAG CAAAGGATTC AGTAGCTGTA ACTAAAACGG TTCCGCCGTG CACTACTCCG AATGCAGTTA CTCCGGCAGA TATTTCTTAT TGCAGAGGTT CACTGAACGC TGTCCCATTA ACTGCATCTG GTTTGGCTAC AGGCAATAAG TTCCAGTGGT ATACAAATGC TACCGGAGGT GCCGCATCCG ACAATGCACC GACGCCATCT ACTACTACTG CCGGCATTAC TACATATTAT GTAAGCCAGG TTTCAACAAC AAATGCCAGC TGTGAAAGTG TACGTTCACC ATTAAAGGTA ACGATCGTGG CACCGGCAAC AGCCAGTGCA GGCAATACAA TAGCTATTTC TACAGAAACA TCGGTTACAT TAACCGGTAC AGGTTCTGCA GTGGGTACAT GGAGCCTGCT GATCAAACCA ACAGGAGCAG GAACGGTAAC ATTTTCACCG ACAACAGGCG CTTCTGTTAC CGCAAGCGGG TTAACCGTTG ATGGTACATA TACATTTACG TATACCGTTC AGGGAACAAG CCCTTGCGGT GCTGTGGCAG CTTCTGTGAA TGTAAATAAA ACGAGCCCTA GCTGTACCAA TCCGGCAACA GCGAATGCAG GAAATAACCA GACAATTTCT ACCGCGACAT CGGCTACGCT TACAGGTTCC GGTTCTTCCG CAGGTACATG GAGTGTACAG AATAAGCCAG GTGCTGCCAA CGTTACGTTC TCCGGAACAG GTGCTTCTGT TACAGCAAAC GGATTAACAG CAGATGGTGT ATATACATTC GTGTATACGG TAAGTGCTAC CAGCCCTTGT GTTGCAGCAA CCTCTACTAT GACTGTTACG AAAACAACAC CTGTCTGTAC AAACCCAACA GTGGCAAACG CTGGTATGGA TCAGACAATT TCTACTGCCA ATACGGTAAC GCTTACCGGA ACCGGTACAA CTGCCGGAAC ATGGACTGTA TTTTCGAAAC CAGCCGGAAC AACGGTTACA ATCACTCCGT CCGGTACTGC TGCAACTGTT ACTGCAAGCG GCTTAACAGC TACAGGGGTA TACGAATTTA CCTATACGGT AAACGGCGTG TCACCATGTA TAACAGCATC AGACGTTATG AAGGTTACAA AGTCTACAAC AACGGCTATC AATTCTGCTT ATTTGAATGA TAACATTGAA CTGTATCCAA ACCCTGTTAC TGAAACATTG TTTATTGGAA TGGATCGCGT AGAAGGTTCT AAATCGTTAA CGGTAGTAGA TATGCTTGGT AAAATTGTTT ATGCTGCCGA TGCTGTATCT ATTGCAAATA TTGATATGTC TGATTTAAGC AGAGGTATGT ATTTTGTACA CATCGAAACG GAATCAGGAA AAATAACAAA GTCTGTTATT AAACAATAA
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Protein sequence | MNIRSTLQAG LITLAMVFCS MLAVNAQTTP VQKYGQLKIF NGKVSDQNNN PVVLRGMSLF WSGYPEGAPY YNATTVKWLR DDWCVDVVRA AMSVETGSSN YVNNPAAEMA KVKAVIDACI ANGVYVIVDF HTHNAENYKN QAKTFFTEIA TTYGNVPNVL YETFNEPIYQ SWSGTIKPYH NELIQTIRAK DPDNIIICGT RTYSQEVDEA ANDPVTGTNI AYTVHYYANS HQGSLRQKVT NALNKGVAIF ATEYGTTDAS GNGGYNPGES QTWWNFLEAN KISSANWSVT NKNETSAALK PGTGISNWTT NDLTASGALV RAYLKGKCNV TVTTGSVTVA FAGNKIVYDA GETVTMTATA TVANGTISKV EFYSGTTLLN SDASSPYTFS TSTLASGGHS ITAKSYDAAG AVIAISPVYV ISIIGASNVA TTGITDQFEN TDQFSELTGG VNGASCGTAT AAAAAGIYWF EDRDAATPFK AEATRTGNGT LQYLISQPQK SYNVIGFNFG EYCQGTTKQK YTLDLTQNAV LQLTVAAPAT NTATLDLKFQ MKDADGTVIA INKTFLTETV ATNWYKYEIG FSKNHLAPDY LSLAPGTTTN FSFDFKNTLS IKNPNNPNFP TDINLNNTDF DFSKVVEVVI IPVNKQDTGT PNYDPLAFTD QKIIFSGLKL GNPALGVDIC TTPKAVTTAT KSYCQNATNA VALTATGTAG LTLKWYASAT GGVANTVAPI PSTSVAGDQT YYVSQAVPGS STCEGPRTEL KVTIVPAATS DAGQDVTITS ATSASLTAVG SSAGTWSTYS VPTGATVTFS PSATSAAVTA NGLTVNGTYG FVYTVAGTGS CASAKDSVAV TKTVPPCTTP NAVTPADISY CRGSLNAVPL TASGLATGNK FQWYTNATGG AASDNAPTPS TTTAGITTYY VSQVSTTNAS CESVRSPLKV TIVAPATASA GNTIAISTET SVTLTGTGSA VGTWSLLIKP TGAGTVTFSP TTGASVTASG LTVDGTYTFT YTVQGTSPCG AVAASVNVNK TSPSCTNPAT ANAGNNQTIS TATSATLTGS GSSAGTWSVQ NKPGAANVTF SGTGASVTAN GLTADGVYTF VYTVSATSPC VAATSTMTVT KTTPVCTNPT VANAGMDQTI STANTVTLTG TGTTAGTWTV FSKPAGTTVT ITPSGTAATV TASGLTATGV YEFTYTVNGV SPCITASDVM KVTKSTTTAI NSAYLNDNIE LYPNPVTETL FIGMDRVEGS KSLTVVDMLG KIVYAADAVS IANIDMSDLS RGMYFVHIET ESGKITKSVI KQ
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