Gene CHU_1103 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_1103 
Symbol 
ID4187150 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp1279377 
End bp1280231 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content36% 
IMG OID638071101 
Producthypothetical protein 
Protein accessionYP_677719 
Protein GI110637512 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.200341 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGATA AAAAGAATGC TGCCCTCGAA AACGAAATGA TCCAGACAGG TATTGCCGTT 
CAGCTTGTTC CCCGTAAAAC AAGGCTTATT CATTTTATAA TTGACGGATT TGCACTTCAG
GGAATTATGT ACGTGGTAGA TCTGATTCCA TTTGTTGAGT TGAGTCTGAT ATTTTCATTT
ATGCTGATGC CGTTGTATTA TGTTTTCTTC GAATACTATT TTCAATGGAC ACCCGGCAAG
CTGGCTACTG AATCAGTTGT GGTAAATGCA AATGGTTCTA AGCCTGATCT CAGAAGTATT
ATCTTACGAA CATTTATCAG GCTTATTCCC TTTGAAGTTT TTAGTTTTTT ACCTTCTCCA
TCAAGAGGCT GGCATGATAA GTGGTCGGAT ACATGTGTCA TTCAATCTGC CGATGTTACA
AAACTTCGTG AAAAGAACGG TCAGTACAAT CTTGCTCCGG AAGAAAGAAA GATAGGTGTA
TTTGTTTATG TATGCATCGC TTTATTTATT GTGACTGTTG GAGCTGGTGT AGTATTATCA
AAGATCATGA CAGAAAAAAT AACTGCCGAA GGCGCGTATT GGTTGAAAGA ATCTAATGAG
AAGGATGCAA AGAATATTCT CGGTACATGG AATACGAATG ATGCAGAACT GGGTAAATTA
AATTTTGTAA CAAGAGACGT CGTTATCTCT AATGGCAGCA GAAATCTTAA TTATAAAATT
GAAAACCGGA TATTGATCAT TACAGATAAT AAAGGCTTTT TAAAGAATAT GATTATTGTA
GAAAAAGTAC CAGCGACTTT AATATTACTG GACGCAGACA ATCCGGAAAA TAAACTTGTA
TGGACTAAAT TGTAG
 
Protein sequence
MNDKKNAALE NEMIQTGIAV QLVPRKTRLI HFIIDGFALQ GIMYVVDLIP FVELSLIFSF 
MLMPLYYVFF EYYFQWTPGK LATESVVVNA NGSKPDLRSI ILRTFIRLIP FEVFSFLPSP
SRGWHDKWSD TCVIQSADVT KLREKNGQYN LAPEERKIGV FVYVCIALFI VTVGAGVVLS
KIMTEKITAE GAYWLKESNE KDAKNILGTW NTNDAELGKL NFVTRDVVIS NGSRNLNYKI
ENRILIITDN KGFLKNMIIV EKVPATLILL DADNPENKLV WTKL