Gene CHU_1078 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_1078 
SymbolwaaM 
ID4184355 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp1252710 
End bp1253585 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content40% 
IMG OID638071076 
Productlauroyl/myristoyl acyltransferase 
Protein accessionYP_677694 
Protein GI110637488 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1560] Lauroyl/myristoyl acyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.210564 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCGAT TTATTCTTAC AGGAATATCC AAACTCCCCT TTTCTCTTCT ATATATGCTT 
TCCAGTACTG TTGCTTTTTT ATTGCAGTAC ATTGTCCGGT ATAGAGCAAA GGTAATATAT
AGAAACTTAA AAAATTCTTT CCCGGAAAAA AGTGAGGCTG AAATAAAGCA GATCACGAAA
GATTTTTATC TGAATCTTAC TGACGTTAGT TTCGAGTCAT TAAAACTGGT AAGTATTTCA
AAAGAAGAAC TCGAGAAACG GGTACGCATC ACAAATATTG ATGTACCCAT GTCTACGCTG
GATAACGGAC AATCACACCT GGGCTTAACA AGCCATTTGT GTAATTGGGA ATGGCTGCTG
CAAATCTGTG CCGTACAGTC CAAGTACCCG ATTGATGCAG TGTACAAACC ACTGCACAAT
AAAAAGATGG ATACATTTGT ATACAACCTG CGTGCACGTT TTGGCGCACA TCCGGTAGCT
ATGAAAGATA CCTTACGCGA ACTGATTAAA AACAGAAAAA CCGTTCGTTC TATGGCAATG
GTTGCAGACC AAACGCCGCC ACACAGCGAG ATTCAGCATT GGGCAACATT CCTGAATCAA
TATACTCCCT TCTATGTGGG CGGAGATAAG ATCGGAGGAG CTATGCAGAT GCCTGTCTTA
TTTGTAAGTA TGAAACGAAT CAAACGGGGG TATTATGAAG TGACGTTTGA AATCTTGAAA
AACATTCCGA TTGCAAAAGA AGGGCACGAA ATTACCGAAC GTTACATCAA TCGCTTAGAA
GCTTGTATTA AAGAACAGCC TGCCAACTGG CTGTGGTCTC ATAAACGCTG GAAACATGTA
GAAGCAAAGA TTGTGAGAAA AGGAACAGTT GTGTAA
 
Protein sequence
MIRFILTGIS KLPFSLLYML SSTVAFLLQY IVRYRAKVIY RNLKNSFPEK SEAEIKQITK 
DFYLNLTDVS FESLKLVSIS KEELEKRVRI TNIDVPMSTL DNGQSHLGLT SHLCNWEWLL
QICAVQSKYP IDAVYKPLHN KKMDTFVYNL RARFGAHPVA MKDTLRELIK NRKTVRSMAM
VADQTPPHSE IQHWATFLNQ YTPFYVGGDK IGGAMQMPVL FVSMKRIKRG YYEVTFEILK
NIPIAKEGHE ITERYINRLE ACIKEQPANW LWSHKRWKHV EAKIVRKGTV V