Gene CHU_1058 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_1058 
Symbol 
ID4185016 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp1223393 
End bp1223749 
Gene Length357 bp 
Protein Length118 aa 
Translation table11 
GC content40% 
IMG OID638071057 
Producthypothetical protein 
Protein accessionYP_677675 
Protein GI110637468 
COG category 
COG ID 
TIGRFAM ID[TIGR03643] conserved hypothetical protein TIGR03643 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.448411 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAGCA GCATTTTAAG ACATTATTCC CCGAACAATG ATCCAAACGT TAATGTTTCT 
TCCCGTACAA CCAGGGAAAT ATCGTTGGCT CTTACCCCGG AAGCAATTGA CCGGATCATC
GAGATGGCCT GGGAAGACAG GACTACCTTT GATGCCATAC AATTTCAGTT TGGATTGAAT
GAGGCTGCTG TGAAGACACT GATGAAAAAA CAATTAAAAT TAAGTAGCTA CCGGCTCTGG
AGAAAGCGGG TAAATAATTG TAACATGAAG CATGCCGCTA AACGGATAAA TGGAATCGAC
AGGTTTAAAT CTACATTACA AAGAAACATC ACGCACAATA AAATATCTAA ACGATGA
 
Protein sequence
MESSILRHYS PNNDPNVNVS SRTTREISLA LTPEAIDRII EMAWEDRTTF DAIQFQFGLN 
EAAVKTLMKK QLKLSSYRLW RKRVNNCNMK HAAKRINGID RFKSTLQRNI THNKISKR