| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_1056 |
|---|
| Symbol | |
|---|
| ID | 4185014 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cytophaga hutchinsonii ATCC 33406 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008255 |
|---|
| Strand | - |
|---|
| Start bp | 1222043 |
|---|
| End bp | 1222696 |
|---|
| Gene Length | 654 bp |
|---|
| Protein Length | 217 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 638071055 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_677673 |
|---|
| Protein GI | 110637466 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1853] Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 42 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.470635 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAACAC ATCTGTCGTT GAATGATTTA ATGGACATGG AGATACGAAA GCGGGCCAAT
CTGGTTAATT CAACAGGTGG CTTTAAAAGT ATTTGTTTAA TTGGCTCCGT TGATCCGGAA
GGCCGGACCA ATGTAGCGCC CTTCAGTTCT ATTGTTCATA TCGGTGCTTC TCCGCCGCTC
ATTGCCTTTA TTGTGAGGCC GGACTCTGCT GAGCGGCATA CCTTGTCAAA TATTCTCGAA
ACAGGCGTTT ACACCATCAA TCACCTCAAT GAACAGATCT ATCGGCAAGC CCATCAAACA
TCAGCCAGGT ATCCGAAAGA ACAGTCTGAA TTTGATGCGG CAGGATTAAC AGCCGTTTAT
AAAAATGACT TTGCAGCGCC CTATGTCAGC GAAAGTGCTG TGCAGCTTGG TGTGCAATTT
AAAGAACGCA TAGACCTTGC CATCAACGGC ACCATTTTAA TCATCGGGCA AATACTGCAC
CTCTATTTTC CAACGGACTG TCTGCTCGAA GATGCATTCC TTGATCTGGA AAAAGCGAAT
ACGATTACCT GTTCGGGTTT GGACAGTTAT CACAAAACAC AACGGCTGGA ACGATTAAGC
TATGCAAAAC CCGGTCAGGA ACTAACGCCT GTTAATTTCA TGCCTCTTGA ATAA
|
|---|
| Protein sequence | METHLSLNDL MDMEIRKRAN LVNSTGGFKS ICLIGSVDPE GRTNVAPFSS IVHIGASPPL
IAFIVRPDSA ERHTLSNILE TGVYTINHLN EQIYRQAHQT SARYPKEQSE FDAAGLTAVY
KNDFAAPYVS ESAVQLGVQF KERIDLAING TILIIGQILH LYFPTDCLLE DAFLDLEKAN
TITCSGLDSY HKTQRLERLS YAKPGQELTP VNFMPLE
|
|---|
| |