| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_1047 |
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| Symbol | |
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| ID | 4184383 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | + |
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| Start bp | 1207878 |
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| End bp | 1209344 |
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| Gene Length | 1467 bp |
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| Protein Length | 488 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 638071045 |
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| Product | sodium/solute symporter |
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| Protein accession | YP_677664 |
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| Protein GI | 110637457 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0591] Na+/proline symporter |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.322443 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.451489 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGCTC AATTAATTAT TACAATATTA GGAGTGTATT TCGCTGCTTT ACTGCTGATT
GCCTGGTTTA CGTCCAGAAA TGCAGATTCA GATGCTTTTT TTACAGGAAA TAATCAATCT
GCCTGGTATC TGGTAGCTTT TGGTATGATC GGCACTTCGG TTTCAGGAGT AACATTCATT
TCCGTACCGG GACAGGTTGC CGCACAGGGT TTTTCGTATT TTCAGCTCAT ATTGGGCAAT
ATGTTTGGAT ATTTTGTAGT AGCAGCCGTT TTGATGCCTA TTTACTATAA ATCGAACATG
GTTTCCATTT ATACCTTTTT AGAAGAACGG TTTGGATTCT GGTCCTACAA AACCGGTTCT
GCATTTTTCT TATTATCCCG TACAATCGGG TCTTCGCTTC GCCTGTATCT GGCAGCAGAA
GTATTACATA CGTTTCTGTT CCGTGAGCTG GGTGTTTCAT TTATTGTTAC GGTTGGTGTT
ACCATTCTGC TGATCTGGGT GTATACATTT AAGGGCGGCG TTAAAACCAT TATCTGGACA
GACACCTTTC AAACGTTCTT TCTGGTAGGT GCTGTTATCA TCAGTGTTGT TGTTATTTCA
AACCAGTTAG GCTGGGGTAC GGTTGAAATG ATCAAAGAAG TAGATGCAAG TAAATATTCT
ACCATCTTTC ACTTTGAAGA CATAAAATCC CCGCAGTATT TCTGGAAACA GTTTATATCG
GGCATTTTTA TGACGATCGT GCTGACCGGT CTGGATCAGG ATCTGATGCA AAAAAATCTT
ACCTGTAAAA ATCTGGGTGA AGCACAAAAG AATATGTACT GGTTCTCTGT GATACTGGTA
GCAGTAAATT TTTTATTCTT AACCTTAGGT GCCTTGCTCT ATATCTATGC AGATCAAAAG
GGGATAGCAG TTCCTGCACA ATCCGATTTC TTTTATCCGA TTCTTGCCTT AAAATATCTG
GGTGTAATTG CCGGCGTATT CTTTTTGCTG GGAATAACGG CTTCTTCGTA TGCCAGTTCT
GACTCAGCAC TGACAGCGCT GACAACCGCA TTCTGTATTG ACTTCCTCAA TTTTAATAAA
GGCAATGTTG TAAATAAAAA CCGCACACGT ACTTATGTGC ACATAGGTTT TTCTATGCTC
TTTTTTGTGA TTATTGTTTT GTTCAAAGAA TTCAATGAAG GTACAACGGT TATAAAAACA
GTATTAAAAG CGGCCGCTTA TACTTATGGT CCGTTGCTGG GCATGTTTGC CTTTGGTATC
TTCAGCAAGC ACAGAACAGT TACCGATAGA TGGGTTCCTG TTGTATGTAT AGTATCGCCG
CTGCTGACAT TCCTCGTTGT GCTGTTTATC AAAGAGGTAC TCGGGTATCA GACAGCCTTT
GAGGACTTGC TCATCAATGG CGCCATAACG ATTATAGGCT TGTTGTGTAT TTCACATGCG
CCTAAACAAC GCGATGCATT TTCATAA
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| Protein sequence | MTAQLIITIL GVYFAALLLI AWFTSRNADS DAFFTGNNQS AWYLVAFGMI GTSVSGVTFI
SVPGQVAAQG FSYFQLILGN MFGYFVVAAV LMPIYYKSNM VSIYTFLEER FGFWSYKTGS
AFFLLSRTIG SSLRLYLAAE VLHTFLFREL GVSFIVTVGV TILLIWVYTF KGGVKTIIWT
DTFQTFFLVG AVIISVVVIS NQLGWGTVEM IKEVDASKYS TIFHFEDIKS PQYFWKQFIS
GIFMTIVLTG LDQDLMQKNL TCKNLGEAQK NMYWFSVILV AVNFLFLTLG ALLYIYADQK
GIAVPAQSDF FYPILALKYL GVIAGVFFLL GITASSYASS DSALTALTTA FCIDFLNFNK
GNVVNKNRTR TYVHIGFSML FFVIIVLFKE FNEGTTVIKT VLKAAAYTYG PLLGMFAFGI
FSKHRTVTDR WVPVVCIVSP LLTFLVVLFI KEVLGYQTAF EDLLINGAIT IIGLLCISHA
PKQRDAFS
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