Gene CHU_1038 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_1038 
SymbollpxD 
ID4184374 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand- 
Start bp1197797 
End bp1198846 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content39% 
IMG OID638071036 
ProductUDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 
Protein accessionYP_677655 
Protein GI110637448 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1044] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 
TIGRFAM ID[TIGR01853] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.897963 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATTTA CTTTAGAGGA AATAGCGCAC CTATTAGGTG GAGAAGTAAA AGGAGATGGG 
AAAGCTAAAG TCAGTTCAAT TGCAAAAATT GAAGAAGCTT CCTCCGGAAG TATTTCCTTT 
TTATCTAATC CCAAATACGA AAGTTTCATT TATTCCACCA ATGCCAGTGC GGTTATTGTA 
AAAAAGGATT TCCAGCCACG GGAATCGTTA AAGACCTCTT TAATACTTGT AGACGATCCA 
TACACAAGTT TTACCACGAT TTTAGAAGCT TATCAACAAG CATTAAACGC TTCAAAAATG 
GGTAAAGAAG AACCCAGCTT CATCGGAAAA AATGCTGTAA TTGGTTCTAA TCACTATATC 
GGAGCCTTTG CATACATTGG TTCAAATTGC AAAATCGGCA ATAATGTTAA GATTTATCCA 
CAAGCATACA TTGGAGACAA TGTTACTATT GGTGACAATA CAACTATTTA TGCCGGTGTT 
AAAATATATG CTAACTGCGA GCTTGGCAAT CAGGTTACCA TTCATTCCGG CTGTGTGATC 
GGAAGCGACG GTTTTGGTTT TGCTCCTCAG GCAGACGGAA CGTATAAAAC CATTCCGCAG 
ATCGGAAATG TTGTAATCGG CAACCACGTT GACATTGGCG CAAACACAGT TATCGACTGC 
GCTACAATGG GTTCTACCAT TATTTATGAC GGAGTAAAAA TAGATAACCT GATCCAGATT 
GCACACAACG TTAAGATTGG AAAAAATACC GTTATCGCTG CTCAGGCAGG CATTTCAGGC 
TCTACAACCA TTGGTGAAAA CTGCATCATT GCCGGCCAGG TAGGTATTAT CGGCCACATT 
AAAATTGCAA ATAAAACAAC CATTGCAGCG CAAGCGGGCA TTGGCAGAAC TATATCAGAA 
GAAGGACTCA CACTATTAGG CTCCCCGGCC ATAGAAAAGT TAGATTTTTT AAAATCATTT 
GCCATATATA GAAAACTTCC CACATTACAG AAGCGTATAG AGGAATTGGA AGAAAAAACA 
CTAAATTTGT CTGGAATAAA GGAATCCTAA
 
Protein sequence
MEFTLEEIAH LLGGEVKGDG KAKVSSIAKI EEASSGSISF LSNPKYESFI YSTNASAVIV 
KKDFQPRESL KTSLILVDDP YTSFTTILEA YQQALNASKM GKEEPSFIGK NAVIGSNHYI 
GAFAYIGSNC KIGNNVKIYP QAYIGDNVTI GDNTTIYAGV KIYANCELGN QVTIHSGCVI 
GSDGFGFAPQ ADGTYKTIPQ IGNVVIGNHV DIGANTVIDC ATMGSTIIYD GVKIDNLIQI 
AHNVKIGKNT VIAAQAGISG STTIGENCII AGQVGIIGHI KIANKTTIAA QAGIGRTISE 
EGLTLLGSPA IEKLDFLKSF AIYRKLPTLQ KRIEELEEKT LNLSGIKES