| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_1037 |
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| Symbol | lpxC |
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| ID | 4184373 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 1196399 |
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| End bp | 1197787 |
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| Gene Length | 1389 bp |
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| Protein Length | 462 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 638071035 |
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| Product | bifunctional UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase/(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase |
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| Protein accession | YP_677654 |
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| Protein GI | 110637447 |
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| COG category | [I] Lipid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0764] 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases
[COG0774] UDP-3-O-acyl-N-acetylglucosamine deacetylase |
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| TIGRFAM ID | [TIGR00325] UDP-3-0-acyl N-acetylglucosamine deacetylase
[TIGR01750] beta-hydroxyacyl-[acyl carrier protein] dehydratase FabZ |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0742061 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTATACTA AACAACACAC TATAAAAGCG CCTGTAAAGG TTTCAGGCGT TGGACTGCAT
ACTGGTGCTC AAGTAAATCT TACATTTGTT CCTGCTCCGA TCAATCATGG TATTTTATTT
AAACGCGTTG ATCTACCCGA TCAACCGGTT GTAGAATGTG ATGTTGATAA TGTGGTTGAC
GTTTCAAGAG GAACTTCGAT TGAAAAAAAC GGAGCCCGTA TCAACACCGT AGAACACGCA
TTAGCCGCTC TTGTTGGTTT ACAGATTGAC AACATTCTTA TTGAACTGGA TGGCCCTGAA
ATTCCGATCA TGGATGGAAG TTCCCTTCCG TTTATTGAAG CGATTAATGC AATTGGTTTA
GAAGAACAAA ATGCATTGCG TAACTTTTTT GAAGTACCAC ACGGTATCTT CTTCCAGGAT
GCTGAAAAAA ACATTGAACT TGCCGCTCTC CCATTAGATG ATTACCGGGT AACCGTAATG
GTTGATTACA ATTCTCCTGT ACTTGGAAGC CAGCATGCAA CCTTAAATAA TATCAACCAG
TTTGAAAAGG AAATTGCTTC CTGCCGTACC TTCTGCTTCT TACATGAACT GGAAATGCTG
CATAAGCAGA ACCTGATTAA AGGTGGGGAT CTGAACAATG CAATTGTTAT TGTTGACCGC
ATTGTAAAAG ATGATGAACT GGACAGCCTG GCAAAACTTT TCGGTAAAGA TAAAGTTGAA
GTTAAGAAAG AAGGTATTCT GAATAATATC GAACTTCGTT ATAAAAATGA ACCTGCCAGA
CATAAATTAT TGGATGTTGT TGGTGATTTA GCTTTGGTTG GCCGTCCGTT AAAAGCACAG
ATTATGGCAG CCCGCCCGGG CCATGCCTCT AACGTAGCTT TCGCTAAGAA ATTAAAACGT
GTAATGATGG ATTCCAGACA AAAAGCCCCG CATTACGATA TTACACAGCC GTCTGTGTTG
GATGTAAATC AGATTTATAA ATTACTTCCA CACAGATACC CATTCAAACT GGTTGATAAG
ATTGTACACC TTGACGAGAA TATGATTATC GGCGTTAAGA ATGTTACCAT CAATGAACCG
TTTTTTGAAG GGCATTTCCC AGGAAACCCT GTTATGCCGG GCGTACTTCA GATTGAAGCG
ATGGCTCAAA CAGGTGGTAT CTTTGTGATG CAGTCTGTAC CGGATCCGGA AAATTACTGG
ACCTATTTCC TGAGTATTGA AAGTGCAAAA TTCCGTCGCA TGGTTGTACC GGGCGATACA
TTGGTTTTCA AATGTGAGTT AACGGCACCA ATCAAACGCG GCATTGCAAA AATGCAGGGT
CAGGCTTATG TAGGAGGAAA TTTAGTTTGT GAAGCAAGTT TAACAGCAAG TATTGTTAAA
AAGAAATAA
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| Protein sequence | MYTKQHTIKA PVKVSGVGLH TGAQVNLTFV PAPINHGILF KRVDLPDQPV VECDVDNVVD
VSRGTSIEKN GARINTVEHA LAALVGLQID NILIELDGPE IPIMDGSSLP FIEAINAIGL
EEQNALRNFF EVPHGIFFQD AEKNIELAAL PLDDYRVTVM VDYNSPVLGS QHATLNNINQ
FEKEIASCRT FCFLHELEML HKQNLIKGGD LNNAIVIVDR IVKDDELDSL AKLFGKDKVE
VKKEGILNNI ELRYKNEPAR HKLLDVVGDL ALVGRPLKAQ IMAARPGHAS NVAFAKKLKR
VMMDSRQKAP HYDITQPSVL DVNQIYKLLP HRYPFKLVDK IVHLDENMII GVKNVTINEP
FFEGHFPGNP VMPGVLQIEA MAQTGGIFVM QSVPDPENYW TYFLSIESAK FRRMVVPGDT
LVFKCELTAP IKRGIAKMQG QAYVGGNLVC EASLTASIVK KK
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