Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_1036 |
Symbol | lpxA |
ID | 4184372 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 1195617 |
End bp | 1196396 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 638071034 |
Product | UDP-N-acetylglucosamine acyltransferase |
Protein accession | YP_677653 |
Protein GI | 110637446 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1043] Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase |
TIGRFAM ID | [TIGR01852] acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.0630219 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATCAGC CATTAGCATA TATACATCCG GAAGCTAAGA TTGCACAGAA TGTAGTAATC GAACCATTTA CAACGATTCA TAAAAACGTT GAAATAGGTG AAGGTACCTG GATAGGCCCC AATGTTACGA TTATGGAAGG TGCGCGTATC GGAAAAAACT GCAAGATTTT CCCGGGTGCA TCTATTTCAA CGCTTCCTCA GGATCTGAAA TTTGAAGGAG AAGAAACATT AACAATCATT GGTGACAATA CCGTTATCAG AGAATGTGTT ACCATAAGCA GAGGTACAAA AGATAAATTC AAGACTGTTG TAGGCAGCAA TTGCTTATTA ATGGCATATG TACACATTGC ACACGATTGT ATCGTAGGTG ATCACTGTAT CCTTGCAAAT GCGGTACAGG TTGCTGGCCA CGCTATTATT GATGATTATG CAATCATCAG TGGTGCGAGC GCTATTCACC AGTTCTGCAA GATCGGTGCA CACGTGATGG TATCCGGAGG TTCATTGGTA CGTAAAGATG TTCCGCCATA TACAAAGGCC GGACGTGAGC CGTTGAGCTA TTGCGGGATT AACTCCGTAG GATTAAGACG TCGTGGTTTT TCAAATGAAA AAATCAACGA GATACAGGAT ATTTACCGTG TTATTTATTT AAGAGGATTC AATAACTCTC AGGCATTAAA TCACCTGGAA GTAAACTTCG CGCCTTCAAA AGAATTAGAT GAGATCGTAA ACTTCATGCG CAACTCGGAC AGAGGTATCA TGAAAGGAAT AGGCGACTAG
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Protein sequence | MNQPLAYIHP EAKIAQNVVI EPFTTIHKNV EIGEGTWIGP NVTIMEGARI GKNCKIFPGA SISTLPQDLK FEGEETLTII GDNTVIRECV TISRGTKDKF KTVVGSNCLL MAYVHIAHDC IVGDHCILAN AVQVAGHAII DDYAIISGAS AIHQFCKIGA HVMVSGGSLV RKDVPPYTKA GREPLSYCGI NSVGLRRRGF SNEKINEIQD IYRVIYLRGF NNSQALNHLE VNFAPSKELD EIVNFMRNSD RGIMKGIGD
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