Gene CHU_1029 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_1029 
Symbol 
ID4183766 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp1189068 
End bp1189478 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content45% 
IMG OID638071027 
Producttransporter component 
Protein accessionYP_677646 
Protein GI110637439 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.489636 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATACA TTAAATTCTT TCTCATCGGC ATCTACTTTG GTATTGTGCT GACCAAAGCG 
GAAGTGATCT CCTGGTTCCG TATTCAGGAA ATGTTTCATT TCCAAAGTAT ACACATGTAT
GGTATTATCG GTTCTGCTGT TGTTGTTGGA GCCATCTCTG TGTTTCTTAT TAAGAAATTC
AACCTGAAAA GTTTCGGCGG TGAAGAGATC CGTCTCATCA GCAAAGAGTA TCACAAAGGC
TTATTGCCGG GCGGAATCAT CTTTGGGCTG GGCTGGGCTT TAACAGGCGC GTGTCCGGGG
CCGATGTTTG CATTGCTTGG TAATGGAATA GAAGTAATGC TGGTTGCAAT ACTCTCTGCA
ATTGCAGGCA CGTTTGTGTA TGGGGTGGTG AAGGATAAGC TGCCGCAGTA G
 
Protein sequence
MKYIKFFLIG IYFGIVLTKA EVISWFRIQE MFHFQSIHMY GIIGSAVVVG AISVFLIKKF 
NLKSFGGEEI RLISKEYHKG LLPGGIIFGL GWALTGACPG PMFALLGNGI EVMLVAILSA
IAGTFVYGVV KDKLPQ