| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_1022 |
|---|
| Symbol | |
|---|
| ID | 4183759 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cytophaga hutchinsonii ATCC 33406 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008255 |
|---|
| Strand | + |
|---|
| Start bp | 1173263 |
|---|
| End bp | 1176532 |
|---|
| Gene Length | 3270 bp |
|---|
| Protein Length | 1089 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 638071020 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_677639 |
|---|
| Protein GI | 110637432 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG3202] ATP/ADP translocase |
|---|
| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAGT TTTTTAAAAA GTATCTCAAT AAACTTCTGG ACATAGAGCA GGGAGAATTA
AAGCCGGTTC TATTGTTGCT GTTCTTTTCA TTTTTTTTAG GGATAAGTGT TGTAACGTAC
GACATTGGTT CCAGTACAAT GTTCCTGGAA TTTTATGATC AGAACAGAAT CTCAGAAGCC
TTCTTAGTGT CAGGTTTATT AGGCGTTGTA TCAACATTGA TTTTCGCGTA TTTTCAAAAA
CGTATTCCAT TTTCAATCTT AGCACGCATC ACACTAATAT TAGTTTTAGT AACGATCATT
GTTTTTACTT TTTTATTACA GCGCTTTCCC GATATTCATA AATTACGTTA TCTGGTTTTT
GCCAGTCTGG GTAGTATTAA TGCCTTAACA TTATTGTGTT TTTACGGTAT TATAGGCCGT
GCATTTAATC TTAGAAATGA AAAGCGGTTA ACCGGTACCG TAGATCAGGG ACAATTGTTC
GCTACCGTAA TTGCCTTTTT CGTTGTATTC CTTATTCCGG AATCGGTACC TGTGGTGGAT
TATTTCTATT TCAGTGTGGG AGCAATGATT GTATCTTTTT CATTATACAT CCTGTTTATC
CGCCGCCATT CTACCGAAAA ACTTCTTACG ATTAATAAAG CAGAAGAACT GGAGGCGTCA
CCTGGTTTCA GACAGTTGTT CAGCAACAAA TACATTCGGC TGCTGGCTCA GCTATCGCTG
GTATCGGTTA TTATTTTGCA ATTCATGGAA TTCTCGTTTT TCTCCGCAGG GCTTGAAGCC
TATAAGGAAG TAAGTGCAGA TGGCCGTGTA TATGTGAATG ATATTGATCT GGCAAAATTC
CTTGCCGGGT ATGGTACGGT ACTTACCTTG TTTAATATGA TCTTTCAGCT GGTAGGTGCA
GATCGTATTA TCAATACCAT AGGCGTAAAA CTTTCACTGT TTATTCTTCC GGTTTTGCTG
GGTATTTTCT CCATACTCAC GGCGTTGGTA GGAGGTTTCT TCGGAGATAC AAAATATGAT
GCCTTGCTCG GCATTAATGA AACGTTTATC CTGTTTTTTA TATTTGTTTG TTTAAGTAAG
ATCTTTTTAC AGACGTGTAT TGAATCGTTT GAAGAACCGA TTTATAAAAA CTTTTTCCTG
CCGATCAATT CCAGGATCAG ACACGATGTA CAAACGAAAG TAGAAGGTGT TTTCCGTCAG
TTTGCAGTTG TTGTCGCAGC AGGTTTCCTT ATTCTGTTTG GGGTACTTTC TTTCAAACTG
ATTTACTTTA GTGTAGCACT TATTATTGCG GTGTGTATCT ACACATATGT GATTGTAAAG
CTATATACCG AATACCGTTC AACATTGCAG GATACACTTA CGGCACAACG CGGCAGACAG
GATTTTCGAG ATGACAGCAA TGATAAATCG GTGCAGGCTA TTTTGTTGCA GGAATTGAAA
ACGGATAGCG GAACACGTAT TATCACGACG CTTAAAATGA CCGAGCGCCT TGATCCGGCA
TTGCTTGAAA AGTCGGTTCA TCTGTATACA AACCATGCAT CAGAACGCGT GCGGAGATAT
GTATTCAATA AAATCGAAGA GTCTAAATTA TTGTCGGCAT CACATGAACT GAAGGAAATA
ATCCGTAAAA AAGAAATTCC GATCGAAACA AAAGCATTGG CAGAGCATGC CTTGTTAAAT
CTGAATGATG TTGAAAAAAT GCTTACCTCG CCCGGACAGA TTTTAAAACT CTCCCGCTCT
AAAGATCCTG TTGATAAAGA GCTGGCGGTA AAACTGATCC GGAATAATTT TAACGAAGAA
ATGGCGCGCC AGCTCTTCGA TTTACTCAGA GAATCTAATC CGCGTGTACG AAAGTCTGCT
TTGCTTACGG CAGGTACCAT CAAGCTTACG CAATACTGGA TGCTGCTGAT TGAAAATTTA
TCGCTTCCGA GTTTTGCAAA TTTTGCTTCA GCAGGATTGG AATACATTGG CGAAAAAGTT
ATACCTACAC TTGATCTGGC GTTTTATAAA ACAGGTCAAA ACCTTCAGAC CAAAATCCGG
ATCATTCAGG TATATTCAAA AATCGGCGGA GAACATGCCA TTGAAGTATT GTGGAATAAG
ATCAATTATC CGGATCGTAA AGTCGTATCC GAAGCATTGC TTGCGCTTCG CAACCTCGCT
TACATTGCTA AAGGCGATCG TGCCAGTAAG ATCAAGCAGT TACTGATTCA GGAAATTGCT
TTGTGCTCCT GGAAGATTGC TGCACTGGAT GAAATAAAAG AACAGATAAA TCCGACACCG
TTGTATCAGG CATTACTGGA AGAGATTGAA GAAAATGATG AAAATATTTA TATGTTGTTG
TCTCTGATTT ATCATCAGGG GTCTGTTAAA CTGGTAGAAG AAAATATCAA AAGCCGAACG
GTAGAAGGTG TACTCTATGC TATTGAATTG CTGGATGTGT TTGTGGATGA TGAATTGAAA
CCCATGCTGG TTCCGCTTCT GGATCAGATT TCCTTGTCTG AAAAGATTCT GAAGCTTCAG
GAATCTTTCC CGAGAGAGTC ATACGATGAG ATTACTATTT TATACCATCT CATTAACAAG
GACTATAATG AGATAAACCG TTGGACAAAA GCCTGCGCGA TTCATAAATT ACTTTTAATG
AAAAAAGTAA AAGTAAACGA TACACTTATC GCCAATCTTT TTAATCCGGA TAAATTAATC
CGCGAAGTTA CCGCAAAGCT GATTCATACA AATGATCCGG ATGCCTATCA CGTGTTATGT
CAACGTATTC CTGAAAGGCA TAAAAAAGAA CTGGATGCGT TAATCGTTTC TAGTAAGATG
GTAAGCTGGA AAACGGATAT GTTTGAAAAA GTTACGTTTC TGAAATCCAT TCCTGTGTTC
CTGAATATTT CCGGGGCATT ACTCGCGTTG CTGGCGGATC ACATTGAAGA AATGCATCAC
AAAGCAGGAG AAGTGTTGTA CAAGGATAGT CTGAATGGCG CAAACCCTGT ATCAATTGTT
TATTCCGGTA TGATCTCCCT TTCGCACGCA GACGGATTAA TAGAAGGTAC TTACGGTTCT
AAATATGTAC TGGGAGATGA ACTGATCCTG GATACAGATG TGATGAACTA TACCGTAACA
GCAACAGAAG ATACGATCAT TTTCAAAATT GATAAGGACC GATTCTTTGA TATTGTTTCC
AGTCATTATG TATTATCAAG AGCAGTAATT CCTGCGCTGA ATAATGAACT GGAAGAAGCA
TATATTAAAA ACGAACTTGT AGTTAAATAA
|
|---|
| Protein sequence | MKKFFKKYLN KLLDIEQGEL KPVLLLLFFS FFLGISVVTY DIGSSTMFLE FYDQNRISEA
FLVSGLLGVV STLIFAYFQK RIPFSILARI TLILVLVTII VFTFLLQRFP DIHKLRYLVF
ASLGSINALT LLCFYGIIGR AFNLRNEKRL TGTVDQGQLF ATVIAFFVVF LIPESVPVVD
YFYFSVGAMI VSFSLYILFI RRHSTEKLLT INKAEELEAS PGFRQLFSNK YIRLLAQLSL
VSVIILQFME FSFFSAGLEA YKEVSADGRV YVNDIDLAKF LAGYGTVLTL FNMIFQLVGA
DRIINTIGVK LSLFILPVLL GIFSILTALV GGFFGDTKYD ALLGINETFI LFFIFVCLSK
IFLQTCIESF EEPIYKNFFL PINSRIRHDV QTKVEGVFRQ FAVVVAAGFL ILFGVLSFKL
IYFSVALIIA VCIYTYVIVK LYTEYRSTLQ DTLTAQRGRQ DFRDDSNDKS VQAILLQELK
TDSGTRIITT LKMTERLDPA LLEKSVHLYT NHASERVRRY VFNKIEESKL LSASHELKEI
IRKKEIPIET KALAEHALLN LNDVEKMLTS PGQILKLSRS KDPVDKELAV KLIRNNFNEE
MARQLFDLLR ESNPRVRKSA LLTAGTIKLT QYWMLLIENL SLPSFANFAS AGLEYIGEKV
IPTLDLAFYK TGQNLQTKIR IIQVYSKIGG EHAIEVLWNK INYPDRKVVS EALLALRNLA
YIAKGDRASK IKQLLIQEIA LCSWKIAALD EIKEQINPTP LYQALLEEIE ENDENIYMLL
SLIYHQGSVK LVEENIKSRT VEGVLYAIEL LDVFVDDELK PMLVPLLDQI SLSEKILKLQ
ESFPRESYDE ITILYHLINK DYNEINRWTK ACAIHKLLLM KKVKVNDTLI ANLFNPDKLI
REVTAKLIHT NDPDAYHVLC QRIPERHKKE LDALIVSSKM VSWKTDMFEK VTFLKSIPVF
LNISGALLAL LADHIEEMHH KAGEVLYKDS LNGANPVSIV YSGMISLSHA DGLIEGTYGS
KYVLGDELIL DTDVMNYTVT ATEDTIIFKI DKDRFFDIVS SHYVLSRAVI PALNNELEEA
YIKNELVVK
|
|---|
| |