Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_1019 |
Symbol | ykgF |
ID | 4183756 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 1166775 |
End bp | 1168145 |
Gene Length | 1371 bp |
Protein Length | 456 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 638071017 |
Product | ferrodoxin |
Protein accession | YP_677636 |
Protein GI | 110637429 |
COG category | [C] Energy production and conversion |
COG ID | [COG1139] Uncharacterized conserved protein containing a ferredoxin-like domain |
TIGRFAM ID | [TIGR00273] iron-sulfur cluster-binding protein |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAGCG CTGAAACTTT CTTACAAGAC GCAGACTCCA AAACCTTTGA TCCGGAACAC CGTCGTAAAA TCAATTTCAA TATTGGCCGT TACAACGATG CTGTTGCGAA AGGGTTTTCT CAATTCGATA ATCATGAATT GGGAAGACAG CGTGCTTCGT ATTTAAAAAC ACAGGTGATC GAAAACCTGG ACAAATATTT AATTGAATTT GAAACAAACT TTACCCGCAA CGGCGGTAAA GTAATCTGGG CACAGGATGC AGCCGAAGCA TTAAAAGAGA TACATAAAAT TCTTAAAGAG AAAAAGACAC GTAGCGTGGT TAAATCTAAA ACCATGACAA CGGAAGAAAT TCACTTTAAT GCATATCTGG AAAAGAACGG CATTGAATCC ATTGAAACAG ATCTGGGTGA ATATATTGTA CAACTGGCCG GCCAACGCCC CTATCACATT GTTACACCTG CCATGCACAT GTCGCGCCAC GATATTTCTA AATTGTTTGA AGAAAAATTA GGCATACCCT ATACCGAAGA TGCCCAGGAA TTAACGCTTA CAGCGCGCCG TATCTTACGC GAAAAGTATC TGGATGCGGA AGTAGGTGTA TCGGGCGCTA ACTTTTTAAT TGCGGATGTA GGCGGCATTG CAATTACTGA AAATGAAGGA AACGCACGCT TATCCACTAC ATTCCCGAAA ACACATATTG CTATTGTTGG TATCGAAAAA CTGATTCCTT CTCTTACAGA CTTAGGTTTA TTCTGGCCCA TGCTGGCACA AAGCGGAACC GGGCAACAGG TTACCGTTTA CAATACCGTT CTTATAGGCC CCGCCAGACA AGGCGAAAGT GACGGTCCGG AAGAAATGTA TGTAGTATTG CTTGACAATG GCAGAACCAA CTTAATGGTT GATCCCGAAA AACGCCAGGC ATTAAACTGT ATACGCTGCG GAGCCTGTTT AAATATCTGC CCGGTATATA GAAACATCGG CGGACATACC TATGCAAGTA CCTACAGCGG GCCGATAGGC TCTGTTATTA CACCGCATCT GGAAGGCATG GAAAAATTCA AACACCTGAG TTATGCCAGT TCTTTGTGTG GGGCATGTAC CAGTGTATGT CCGGTAAAGA TTGATATTCA CAACTTACTG TTATTGAACA GAAATCAAAG CGTTAAGGAA GGCCTTTCAG CCAAGTCTGA ACGCTTTGGA TTTAAGCTTT GGGTACGTGC CATGAAGAAC AGGAAATTAT TGAATTTCCC TGGCGCCGGA CTTAAAAATT TCATGGTAAG CTTTATCTTT AAAAACTCCT GGAGCAAACG CAGAGAAGAT CTGCACGTAG CACCGAAATC CTTCCAGCAG TTGTGGAAAG AACGGAGATA A
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Protein sequence | MKSAETFLQD ADSKTFDPEH RRKINFNIGR YNDAVAKGFS QFDNHELGRQ RASYLKTQVI ENLDKYLIEF ETNFTRNGGK VIWAQDAAEA LKEIHKILKE KKTRSVVKSK TMTTEEIHFN AYLEKNGIES IETDLGEYIV QLAGQRPYHI VTPAMHMSRH DISKLFEEKL GIPYTEDAQE LTLTARRILR EKYLDAEVGV SGANFLIADV GGIAITENEG NARLSTTFPK THIAIVGIEK LIPSLTDLGL FWPMLAQSGT GQQVTVYNTV LIGPARQGES DGPEEMYVVL LDNGRTNLMV DPEKRQALNC IRCGACLNIC PVYRNIGGHT YASTYSGPIG SVITPHLEGM EKFKHLSYAS SLCGACTSVC PVKIDIHNLL LLNRNQSVKE GLSAKSERFG FKLWVRAMKN RKLLNFPGAG LKNFMVSFIF KNSWSKRRED LHVAPKSFQQ LWKERR
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