| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_1005 |
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| Symbol | ugpQ |
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| ID | 4186916 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 1153730 |
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| End bp | 1154545 |
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| Gene Length | 816 bp |
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| Protein Length | 271 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 638071002 |
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| Product | glycerophosphodiester phosphodiesterase |
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| Protein accession | YP_677622 |
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| Protein GI | 110637415 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0584] Glycerophosphoryl diester phosphodiesterase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.382859 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0862396 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATTCAGG TACCCGCTTC TTTTGACATA CAGGGCCACA GGGGCTGCCG TGGCTTGTTA
CCGGAAAATA CGATCGCTGC TTTCACCAAA GCCTTATTAC TGGGCGTAAC AACGCTGGAG
TTTGATTTGG TTATATCAAA AGATAACCGA GTGGTTGTAT CGCATGATAC TTTTTTTCAT
CATGAAATAA CCATGATGGT AGACGGCGAA GATGTTACTG AAGCGAATGA GAAAAATTTC
AATTTATATG CGATGAATTA TGCAGATATA AAAGAAATTG ATGTCGGTAT GAAAACACAT
CCGCGTTTTA AAAGTCAGAA AAAAGTACCG GCGGTTAAGC CGCTATTCAG AGAATTAATA
GAAACAGCTG AAAAACTCAG CGCTAAAATT CAGTATAACG GTGAAATAAA ATCTACCGTT
GAAGGCGACA ACATTGACCA TCCGAACATT GCCTTATTCT GTGATCTTGT TGTTGCTGAA
ATAAAAAAAG CACATATCAC AGACCGCTTC ACTCTTCAGT CATTTGATGT ACGTGCCTTA
GAGTATATGC ACAGTCAGTA TCCGGATATA AAATTATCCT ATCTGGTAGA AACGAAAGGA
ACATTAAAAA AACAACTCGA AAAATTATCC TTCACTCCTG CTGTATATAG CCCGGACGTT
ACTCTTGTAT CCAAAAAAGA TATAGACGCT GCGCACAAAC TGGGTATGCG CGTTATTCCC
TGGACGGTAA ATACAAAAGA AGAAATTGAA ACCCTTATTA GCTTAGGTGT TGACGGAATT
ATTACCGATT ATCCAGATTT ATTTTTTGAG AAATAA
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| Protein sequence | MIQVPASFDI QGHRGCRGLL PENTIAAFTK ALLLGVTTLE FDLVISKDNR VVVSHDTFFH
HEITMMVDGE DVTEANEKNF NLYAMNYADI KEIDVGMKTH PRFKSQKKVP AVKPLFRELI
ETAEKLSAKI QYNGEIKSTV EGDNIDHPNI ALFCDLVVAE IKKAHITDRF TLQSFDVRAL
EYMHSQYPDI KLSYLVETKG TLKKQLEKLS FTPAVYSPDV TLVSKKDIDA AHKLGMRVIP
WTVNTKEEIE TLISLGVDGI ITDYPDLFFE K
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