| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_1004 |
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| Symbol | glpD |
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| ID | 4186915 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | + |
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| Start bp | 1152116 |
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| End bp | 1153747 |
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| Gene Length | 1632 bp |
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| Protein Length | 543 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638071001 |
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| Product | glycerol-3-phosphate dehydrogenase (aerobic) |
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| Protein accession | YP_677621 |
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| Protein GI | 110637414 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0578] Glycerol-3-phosphate dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.100601 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.109273 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAATTACT ACCAACAACG CGCAGCACTT TTAGAGCATG CCACTCAGGT TGAATACGGT
CTTATCGTTA TCGGAGGCGG GGTAACAGGC TGTGGTATCG CATTGGATGC ACAGTCCAGA
GGCATTCCAA CCTTATTGAT TGAGATGCAT GATATTGCTT CGGGTACATC TTCACGTTCT
ACCAAACTGA TCCATGGCGG ACTTCGCTAC CTGAAGCAGC TGGAATTCGG ATTGGTAAAA
GAGACGGGTA GAGAGCGCGC TGTTGTACAT CACCTGGCAC CGCATATCAC TATTCCTGAA
CCTATGTTAT TGCCAATTAT CAAAGGCGGT TCTATGCCTA AATGGATGGC TTCAATGGGT
ACATTAATCT ACGATTTTTT AGCTGGTGTT AAGAAAAGCG AGCGCAGGAA AGTACTCAAT
AAAGCAGATA CACTTGCTGC AGAGCCCTTA TTATCGGGTT TAAATGTTAC CGGCGGTATA
CGCTACTATG AATACCGGAC CGATGATGCC CGTTTGACTA TGGCGCTTGC ATGTACCGCA
AAAGCGCAGG GTACAACGGT ATTGACCTAT ACAAAAGTAG TGAAACTGAT GTACCAGGCA
GGAGAGATCA TTGGTGTAAA AGTAATTGAC CGTTTTACAG ATAAAGAATA TATTTTAAAA
TCGGAAGAAG TGATCAATGC TGCCGGCCCC TGGGTCGACA GCATTGATGA GCAGGATGCG
GATATCCGTA AAAATAAACT GGTACTTACA AAGGGCGTAC ACATTGTAGT GGATTTTAAA
AAGTTTCCGA TTCAGCAGGC CGTTTATTTT GATGTGGGAG ACGGGCGTAT GGTGTTTGCT
ATTCCAAGAG AAAAGAAAAC GTACATCGGT ACAACAGATA CTAAATACAC CGGAGATTAT
AAAGAGCCGG GGATTGAAGA GGCAGATAAA ACCTATTTGA TCGGATGTAT CCGGACAGCG
TTTCCGGGTG TAACCTTGAC GGTTGCTGAT ATAGAAAGTT ATTGGTCGGG CTTACGTCCG
CTGATCCGTC AGCGCGACAG TAAATCGCCT TCGGCTATTT CAAGAAAAGA TGAAGTCTTT
CAAAGCGCAA CCGGTCTGTT AAGTATTGCC GGGGGGAAAC TTACCGGCTA TCGTAAAATG
GCGGAACGTA TTGTCGATAT TGTTGCCGAA CGCTTAAAAC TTGCTTATGA TATTGATACG
TGCCAGACAG AGTTTCATTT ATTAAGCGGC GGCGATATTG CTAAGCACGG CGGGCTAGAC
ACATTTATTG CTGAGATGCT GCCTGTATTG AAAGCATTTG GTTTGGATAC CAATACGGCA
GCACGTATGA TCCGCTTGTA TGGAAGTAAT ATTCATTTGT ATGAAGCCGA ATTAAAACAC
ATAGATGAAA GGCTGGCTTC CATCAATCTT CCGGATTGGC AGAAAGCACA ATTACAGTAC
ACGATCAAAC ATGAGTTTGT TTGTAAACCT GCAGATTTTA TTGTCCGCCG TACGGCAGAC
TTTTATTTCA GACGTGCTGA AGCCGAGCAG TATGCCTCGG AACTTATTAA AGCAATGCAG
CTGCTGCTTG GCTGGACAGA CCAGGAGTAT GCGCTGTACA ACGAAGAATG GCTGTTATTT
CTCAAAAAAT AA
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| Protein sequence | MNYYQQRAAL LEHATQVEYG LIVIGGGVTG CGIALDAQSR GIPTLLIEMH DIASGTSSRS
TKLIHGGLRY LKQLEFGLVK ETGRERAVVH HLAPHITIPE PMLLPIIKGG SMPKWMASMG
TLIYDFLAGV KKSERRKVLN KADTLAAEPL LSGLNVTGGI RYYEYRTDDA RLTMALACTA
KAQGTTVLTY TKVVKLMYQA GEIIGVKVID RFTDKEYILK SEEVINAAGP WVDSIDEQDA
DIRKNKLVLT KGVHIVVDFK KFPIQQAVYF DVGDGRMVFA IPREKKTYIG TTDTKYTGDY
KEPGIEEADK TYLIGCIRTA FPGVTLTVAD IESYWSGLRP LIRQRDSKSP SAISRKDEVF
QSATGLLSIA GGKLTGYRKM AERIVDIVAE RLKLAYDIDT CQTEFHLLSG GDIAKHGGLD
TFIAEMLPVL KAFGLDTNTA ARMIRLYGSN IHLYEAELKH IDERLASINL PDWQKAQLQY
TIKHEFVCKP ADFIVRRTAD FYFRRAEAEQ YASELIKAMQ LLLGWTDQEY ALYNEEWLLF
LKK
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