| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_0998 |
|---|
| Symbol | pgm |
|---|
| ID | 4186909 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cytophaga hutchinsonii ATCC 33406 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008255 |
|---|
| Strand | - |
|---|
| Start bp | 1146144 |
|---|
| End bp | 1147883 |
|---|
| Gene Length | 1740 bp |
|---|
| Protein Length | 579 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 638070995 |
|---|
| Product | phosphomannomutase |
|---|
| Protein accession | YP_677615 |
|---|
| Protein GI | 110637408 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1109] Phosphomannomutase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.133483 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGCCAAAAG CAGACGTTGC AACCAAGAAA AAAATCCAGA CATGGCTGAG CGGCAGTTAT
GATGCAGATA CAAAAAAAGA AATTCAATCT TTAGTAGATG CGGGCAAAGA AGACGAATTG
ATTGAATGTT TCTATAAAGA TCTTGAATTT GGTACAGGTG GTTTGCGAGG CCTTATGGGT
GTTGGTTCAA ACAGAATGAA CAAATATACG ATAGGGGCTG CAACACAAGG TTTGTGTAAT
TACTTAAAAA AGAATTTTCC CGGCCAACCG TTAAAAGCAG CCATCGCACA CGACAGCAGA
AACAATTCAG ACTTTTTTGC CCGTACTACG GCAGAAGTTT TTGCAGCAAA CGGCATTCAG
GTATATTTCT TTAAAGCACT GCGTTCTACA CCGGAACTTT CGTTCGCTAT CCGTCATTTC
GGTTGCCAGA CAGGTGTAGT GCTTACCGCT TCACACAACC CGAAAGAATA TAATGGTTAC
AAAGCCTATT GGAACGATGG GGCACAGGTA ATTGCTCCGC ACGATAAAAA CATTATAACA
GAAGTTCAGA AGATCTCCAG CATCGACGAT GTAAACTTTA ATGCGGACCA ATCATTGATT
ACAGAGATCG GTGAAGAAGT TGATAATGCT TATCTGAATG AAATTGTAAA GCTTACTGTT
TCACCTGACG CCATCAAACG TCAGAAGGAC ATGAAAATCG TTTATACACC CATCCACGGT
ACAGGCATTG TGCTGGTTCC TGAGATTTTA AAACGTTTTG GTTTTGAAAA TGTACGCGTA
GTGCAGGAAC AGGCTGTTCC GGATGGCAAC TTCCCTACCG TAGTATATCC AAACCCGGAA
GAAAAAGATG CTTTAAGCTT AGCTGTGAAA CAGGCAACCG AATGGAACGC AGACCTTGTA
ATGGCAACCG ATCCGGATGC GGATCGCGTA GGCATTGCCA TTAAAAATGA TAAGAATGAA
TTCCAGTTGT TAAACGGTAA CCAGACAGGT AGTTTACTGA TCCTGTATAT GCTGCAGGCC
TGGAAGAATG CGAATAAAAT CACCGGAAAA GAATTCATTG TTAAGACCAT TGTAACAACG
GATCTGATCG AAAAGATCGC GAACAAATTT GGCGTGAAGT ATTACAATAC CTTAACCGGT
TTCAAATACA TTGCCGCTAA AATAAAAGAG CTTGAAGGCA AGGAACAATT CATTGCCGGT
GGCGAAGAGA GCTACGGGTA CCTGATTGGC GACAGCGTAC GCGATAAAGA TGCGATCGCA
TCATGTGCGT TCATTGCTGA AATGGTTGCG TATGCGAAAG ATCAGGGCAA ATCCTTATAC
GACATGCTGC TGGATATGTA CGTGGAATAT GGCTTCTACA AAGAACACCT CATCTCCCTG
ACAAAAAAAG GCAAATCCGG CGCGGAAGAA ATCCAGACCA TGATGAAAGA GCTTCGTGCT
ACGCCTCCTA AAACATTAAG CGGTTCTCCG GTTGAATGGA TGTTCGATTA CGATAGTCAG
CTTGCAACAA ACATTATCAA CGGTACTACA AAGAAAATTG AATTGCCGCA GGAAAATGTA
TTACAGTTCA AAACGGCAGA CGGCACATTA GTATCTGCGC GCCCATCCGG TACAGAACCG
AAGATCAAAT TCTATTTCAG TGTTAACGAA CCGTTGGCAT CAAGAGCAGA ATTCGCAGCG
GTAGATAAAA AATTAGATAC GAAGATTCAG ACGCTTATTA GTGATTTGAA ATTGGCGTAA
|
|---|
| Protein sequence | MPKADVATKK KIQTWLSGSY DADTKKEIQS LVDAGKEDEL IECFYKDLEF GTGGLRGLMG
VGSNRMNKYT IGAATQGLCN YLKKNFPGQP LKAAIAHDSR NNSDFFARTT AEVFAANGIQ
VYFFKALRST PELSFAIRHF GCQTGVVLTA SHNPKEYNGY KAYWNDGAQV IAPHDKNIIT
EVQKISSIDD VNFNADQSLI TEIGEEVDNA YLNEIVKLTV SPDAIKRQKD MKIVYTPIHG
TGIVLVPEIL KRFGFENVRV VQEQAVPDGN FPTVVYPNPE EKDALSLAVK QATEWNADLV
MATDPDADRV GIAIKNDKNE FQLLNGNQTG SLLILYMLQA WKNANKITGK EFIVKTIVTT
DLIEKIANKF GVKYYNTLTG FKYIAAKIKE LEGKEQFIAG GEESYGYLIG DSVRDKDAIA
SCAFIAEMVA YAKDQGKSLY DMLLDMYVEY GFYKEHLISL TKKGKSGAEE IQTMMKELRA
TPPKTLSGSP VEWMFDYDSQ LATNIINGTT KKIELPQENV LQFKTADGTL VSARPSGTEP
KIKFYFSVNE PLASRAEFAA VDKKLDTKIQ TLISDLKLA
|
|---|
| |