Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_0970 |
Symbol | |
ID | 4184946 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 1117171 |
End bp | 1117761 |
Gene Length | 591 bp |
Protein Length | 196 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 638070967 |
Product | proline hydroxylase |
Protein accession | YP_677587 |
Protein GI | 110637380 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG3751] Predicted proline hydroxylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.00650089 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.084866 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAATCGT CGTTTGAAAC GTTAATCAAT AGCTATATTG AAACAAGAGT TGGTATTGCC GAAGATTTTT TAAGCAATAC ATTATCCCTG CATCTTAGAA ATCATTTATT AAAGATACAC GCAGATAATC TGATGCATGC AGCCGGAACA GGAAATTCCG GCAATATTGT ACCGGATAAA AAAGTGCGCG GAGATTCCAT CTACTGGCTT GACCGCAGTT ATAACAACAT CCATGAAAAT GATTTTTTAG ATCAGATGGA AGCCTTTATA TCTTATCTCA ATAAGAATTG TTATACAGGA ATTAAAGCGT ACGAATTCCA TTATACCATA TACGAACAAG GAGCCTTTTA CAAAAGACAC ATTGATCAGT TTCAAAATGA TTCCAACAGA GCATTTTCAA TTGTTAGTTA CCTGAATACG GATTGGATTG AAACAGACGG CGGAGAATTA TGTATTCATC ATACCGCTGC GGAACAACGT ATCTCTCCTA CTAACGGGAA AACGGTATTT TTCAAAAGCA ATGAAATTGA ACATGAAGTT TTACCCACAC AGGCAAACAG ATTAAGCATT ACAGGCTGGT TAAAAATATA A
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Protein sequence | MESSFETLIN SYIETRVGIA EDFLSNTLSL HLRNHLLKIH ADNLMHAAGT GNSGNIVPDK KVRGDSIYWL DRSYNNIHEN DFLDQMEAFI SYLNKNCYTG IKAYEFHYTI YEQGAFYKRH IDQFQNDSNR AFSIVSYLNT DWIETDGGEL CIHHTAAEQR ISPTNGKTVF FKSNEIEHEV LPTQANRLSI TGWLKI
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