Gene CHU_0970 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_0970 
Symbol 
ID4184946 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp1117171 
End bp1117761 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content36% 
IMG OID638070967 
Productproline hydroxylase 
Protein accessionYP_677587 
Protein GI110637380 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3751] Predicted proline hydroxylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.00650089 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.084866 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATCGT CGTTTGAAAC GTTAATCAAT AGCTATATTG AAACAAGAGT TGGTATTGCC 
GAAGATTTTT TAAGCAATAC ATTATCCCTG CATCTTAGAA ATCATTTATT AAAGATACAC
GCAGATAATC TGATGCATGC AGCCGGAACA GGAAATTCCG GCAATATTGT ACCGGATAAA
AAAGTGCGCG GAGATTCCAT CTACTGGCTT GACCGCAGTT ATAACAACAT CCATGAAAAT
GATTTTTTAG ATCAGATGGA AGCCTTTATA TCTTATCTCA ATAAGAATTG TTATACAGGA
ATTAAAGCGT ACGAATTCCA TTATACCATA TACGAACAAG GAGCCTTTTA CAAAAGACAC
ATTGATCAGT TTCAAAATGA TTCCAACAGA GCATTTTCAA TTGTTAGTTA CCTGAATACG
GATTGGATTG AAACAGACGG CGGAGAATTA TGTATTCATC ATACCGCTGC GGAACAACGT
ATCTCTCCTA CTAACGGGAA AACGGTATTT TTCAAAAGCA ATGAAATTGA ACATGAAGTT
TTACCCACAC AGGCAAACAG ATTAAGCATT ACAGGCTGGT TAAAAATATA A
 
Protein sequence
MESSFETLIN SYIETRVGIA EDFLSNTLSL HLRNHLLKIH ADNLMHAAGT GNSGNIVPDK 
KVRGDSIYWL DRSYNNIHEN DFLDQMEAFI SYLNKNCYTG IKAYEFHYTI YEQGAFYKRH
IDQFQNDSNR AFSIVSYLNT DWIETDGGEL CIHHTAAEQR ISPTNGKTVF FKSNEIEHEV
LPTQANRLSI TGWLKI