| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_0958 |
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| Symbol | rfaD |
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| ID | 4184934 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | + |
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| Start bp | 1103836 |
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| End bp | 1104780 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 638070955 |
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| Product | ADP-glyceromanno-heptose 6-epimerase precursor |
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| Protein accession | YP_677575 |
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| Protein GI | 110637368 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.257763 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGGTAT TAGTTACGGG TGGTGCAGGA TATGTGGGTA CAGAGTTGGT ATTGAAACTT
GCTAAAGATC CGAGTATTTC TAAAGTTGTT GTATTCGATA ATCTATCCAG AGAGAATTAT
AATTTATTTA TCAATTCTGC ACAGCGTATA GCAAAAGATA AAATTCAGTT TGAATTCGGT
GACTTATTGG ATTCAAGAAA AATCCGGAAA ATATTGGCTG ATATTGATGT TGTCTATCAT
TTGGCTGCCC GTGTTTCTAC GCCGTTTGCA AATGCAGACA GCCATTTGTA TGAGCAGGTA
AACCACTGGG GCACGGCTGA ACTGGTTTAC GCCATTGAGG AAATTAAAAC GGTGCAGAAA
TTGATTTACG TAAGCAGCTG TTCGGTTTAC GGTTCAGGAA AAGAATTGAT TGATGAAAAC
TCCGTTGTAA ATCCTAAAAC GATCTATGGT GTTTCAAAAA TGCGCGGCGA AGAACATGTA
TCACGTTTGG GCAATAAAAT GAATGCCGTT ATCATACGTT TAGGTAATGT ATACGGCTAT
TCATCTTCCA TGCGTTTTGA TGCGGTGATC AATAAGTTCA TGTTTGAATC TCACTACAAA
AACCGAATTT CTATTCATGG CAATGGGCGC CAAAGCCGCT CGTTTATTCA TGTTGACAAA
GCGGTTGATT CATTAGTAAA AATTACGTCA ACGGATATTC CTTCCGGTAC CTATAACTTA
ACAGAACGGA ACCTTGAGAT TTACGATCTG ATTGATCAGG TAAAGGATCT ATATCCTACA
CTTGAATTTA TTTTCATCAA TCAGCATCTT GAATTAAGAG AACAAAAGAT CAATCCGGAA
ACGAAATTGC TGAAGTATAT TCCGTTGCAG CAAACAGATT TCACAGCAGA ATTAGCAGCC
TTCAGAGATC ATTTCACCTT TCAGACAACA AGTGTTCCAG CATAG
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| Protein sequence | MKVLVTGGAG YVGTELVLKL AKDPSISKVV VFDNLSRENY NLFINSAQRI AKDKIQFEFG
DLLDSRKIRK ILADIDVVYH LAARVSTPFA NADSHLYEQV NHWGTAELVY AIEEIKTVQK
LIYVSSCSVY GSGKELIDEN SVVNPKTIYG VSKMRGEEHV SRLGNKMNAV IIRLGNVYGY
SSSMRFDAVI NKFMFESHYK NRISIHGNGR QSRSFIHVDK AVDSLVKITS TDIPSGTYNL
TERNLEIYDL IDQVKDLYPT LEFIFINQHL ELREQKINPE TKLLKYIPLQ QTDFTAELAA
FRDHFTFQTT SVPA
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