Gene CHU_0957 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_0957 
SymbolcysH 
ID4184933 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp1103154 
End bp1103816 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content38% 
IMG OID638070954 
Productphosphoadenylylsulfate reductase (thioredoxin) 
Protein accessionYP_677574 
Protein GI110637367 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0175] 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes 
TIGRFAM ID[TIGR00434] phosophoadenylyl-sulfate reductase (thioredoxin) 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.347212 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAAGG AAGAAATACA TCTGAAACTT ACAGAATATC AGGAAAAAGG CTTGAAGCTT 
TTTACAACTT CATCTTTTCA AACACATAGT ATTGTATTGT TACATATACT GAGTGAATTT
GATCCGTCTA TTCCGGTATA TTTTATTAAT ACAGGCTACC ATTTCCCCGA AACGGTTCTT
TACAGAGATC AGATTGCAGA TCTGTTCAAT CTTAAAAATA TTAAAGTTGT ATCTTCTGCT
ACTCCAAGAA ACATGCAGAA AGATGCTGAA GGCAGATTGC TTTTTACATC TGATCCGGAT
TATTGCTGCT ATTTAAATAA AGTACAGCCG CTGGATGCTG TTCTACCGGA TTATGATATC
TGGATTAATG GTGTACGTGC CGATCAGAGT GCCGTGCGAA AAAGTTTCTC CGTTGAGCAG
CCTGCTCCAC ATGATACGAT TCGTTTCCAC CCCATGCTGG ATTGGGATGT GCGTATGATC
GAAAAGTATA TTAAAGAGCA TAAAATTCCC CGTCATCCGC TGGAAGAAAA AGGTTATTTA
AGTATCGGCT GCGAACCATG TACGCGTAAG TTTGATCTTG AAACATACAA CAGACAAGGC
CGTTGGTTTG GATTGAATAA AACGGAATGT GGGTTAAATA CAGAATTGGT TAGTAAAAAA
TAA
 
Protein sequence
MNKEEIHLKL TEYQEKGLKL FTTSSFQTHS IVLLHILSEF DPSIPVYFIN TGYHFPETVL 
YRDQIADLFN LKNIKVVSSA TPRNMQKDAE GRLLFTSDPD YCCYLNKVQP LDAVLPDYDI
WINGVRADQS AVRKSFSVEQ PAPHDTIRFH PMLDWDVRMI EKYIKEHKIP RHPLEEKGYL
SIGCEPCTRK FDLETYNRQG RWFGLNKTEC GLNTELVSKK