| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_0948 |
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| Symbol | truB |
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| ID | 4183646 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 1097182 |
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| End bp | 1097859 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638070945 |
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| Product | pseudouridylate synthase (pseudouridine synthase) |
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| Protein accession | YP_677565 |
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| Protein GI | 110637358 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0130] Pseudouridine synthase |
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| TIGRFAM ID | [TIGR00431] tRNA pseudouridine 55 synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.276253 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCTACGA ATGAATCCCC CCAGCACGAT TTAGTATTGT GCTTAGATAA GCCTTATCAC
TGGACCTCCT TTGATGTGGT AAAAAAAGTA CGTAGAGTTT TAAAAATGAA AAAGGTTGGT
CATGCGGGCA CGCTTGATCC ACTGGCTACC GGCTTGCTGA TTGTTTGTAC CGGAAAAAAA
ACAAAAACAA TTGAATCGCT GATGGCCGAT GAAAAAGAAT ATTCAGGTGC TATTGGTTTA
GGTGCAACTA CTGCATCATA CGATCTGGAA TTGCCTTTAG AAAACCATAC CGATATTTCA
GGGTTGACCG AGACACAGAT CCGGAAAACG GTGAAACAAT TTTTAGGTAC CATTACACAG
ATCCCGCCTA TTCATTCTGC GGTTAAAGTA GATGGAAAAA GAGCGTACGA CGAAGCACGC
AAAGGCAATG AAGTGATCAT TAAATCGAGG CAGGTTTTCA TTAAAGAATT CAAAATTACA
AAAGTAGAAT TACCCTTAGT GTATTTCAAT ATTGTTTGCA GCAAAGGCAC ATACATACGT
ACCATTGCAA ACGATTTTGG AAAAGCATTA GGCTGCGGCG GCCACCTGAA TGCCTTACGC
AGAGAGCGCA TCGGAACCCT TTCTGTAAAA CAGGCATTAA CTCCGGAACA ACTTGAAGAA
AAATTTTTGT CGATATGA
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| Protein sequence | MPTNESPQHD LVLCLDKPYH WTSFDVVKKV RRVLKMKKVG HAGTLDPLAT GLLIVCTGKK
TKTIESLMAD EKEYSGAIGL GATTASYDLE LPLENHTDIS GLTETQIRKT VKQFLGTITQ
IPPIHSAVKV DGKRAYDEAR KGNEVIIKSR QVFIKEFKIT KVELPLVYFN IVCSKGTYIR
TIANDFGKAL GCGGHLNALR RERIGTLSVK QALTPEQLEE KFLSI
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