| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_0941 |
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| Symbol | acrD |
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| ID | 4183640 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 1088778 |
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| End bp | 1091948 |
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| Gene Length | 3171 bp |
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| Protein Length | 1056 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638070940 |
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| Product | acriflavin resistance protein D |
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| Protein accession | YP_677560 |
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| Protein GI | 110637353 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0389771 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTGCAG ATGTATTTAT AAAACGACCT GTAACTGCTA TTGTAGTATC GGTTGTAATA
ACATTGGTAG GAACATTAAC CTTAATGAAC CTTCCGATCA GTCAATACCC GGATATCACC
CCACCTATTG TGCAGGTAAC AGGTAACTTT GCCGGTGCGG ATGCACAAAC CGTTGAACGT
ACCATTGCTA CTCCTATTGA AGCGCAGGTA AATGGCAGCC CGGGCATGTC CTTCCTACAA
ACAAATAGTA CAAGTGATGG TACTATGACA ATGAATGTAA CATTTGATGT AGGAACAAAT
ATTGATATTG CGACACTTGA TGTACAGAAC AGAGTTAGTG TGGCAACACC TCAACTTCCG
GATGATGTAA AAAAAACCGG CTTAACTGTA CGTAAACGAA ATCCTACGAT CTTAATGCTC
GTAGCCATGT ATTCACCGAA TGGCACACAC GATGTTAAGT TTATGGATAA CTACACGAAC
ATCTACATTA AAGATGCCTT GCTGCGTGTT AAAGGTGTAG GTGATATCTT CACCCGTGCA
GATAACTTCA GTATGCGTAT CTGGATGAAC CCGGATAAAC TGGCACAATA TGGTATGACA
GCAAACGAAG TTGTTGCAAA ACTTCAACAG CAAAACGTTC AGGTTGCAGC AGGTTCAATC
GGTTCCTCTC CTCAGACGCC CGATCAGGCA TTTGAATATT CCATTCAGGT AAACGGTATG
CTTGAAAAAG CTACAGACTT TGAAAACATT GTTGTACGTA CAAAACCCGA TGAAGGCTCA
ATCGTTTATT TAAAAGATGT TGCCCGCGTT GAGTTAGGAA AATTCAATTA CTCCAGTAAT
AACTTTGTTG ACGGAAAAAG ATCTTCGTAT TTATTGGTAT ATCAATCTCC GGGAAGCAAT
GCACTTGAAA CGGCAGAAGG TGTATACAAA GCAATGGAAG AATTGAAAAA ATCTTTCCCG
AATGATGTTG AATATGTAGT ACCGTTTGAA TCTGTTTCTG TAGTTGATGT ATCCATTGAT
GAAGTTGTAC ATACACTTGT GGAAGCATTA TTACTTGTAA TTGTTGTGGT GTTCTTATTC
CTGCAAAGCT GGAGGGCAAC ATTGATCCCG ATCCTTGCAA TCCCGGTTTC AATTATCGGT
ACATTCATCT TCTTCATTCC GCTTGGTTTC ACGGTAAATA CATTAACACT GTTCGGATTT
GTATTAGCAA TCGGTATTGT TGTGGATGAT GCAATTGTTG TGGTAGAAGC CACACAACAT
TACATTGACC ATGAAAAACT TTCTCCGAAA GAAGCGACAA TTAAAGCCAT GAAGGATATT
TCGGGACCGG TTATCGCGAT CGCATTGATC CTTGCTGCTG TATTCGTTCC CGTTGGATTT
ATTCCTGGTA TTGTAGGCCG CTTGTATCAG CAATTTGCAA TCACCATTGC GGTATCTGTA
TTATTATCTG CATTTGTTGC CTTGTCGTTA ACACCGGCAC TTTGTGCGAT GTTATTGAGA
CCTATGCACC TGGATGAAAA TTCACGTGGC TTAAATAAAT TCTTCTTTAA ATTTAACAAT
TGGTTTGCAC GCGTTACTGC CTCCTATTCA AATGGCGTAA AATACTGTAT CCGCAAAGCT
CCTATCGCAA TCATATTATT GATCTGTATT TTCGTTGCTA CCTTTGGTTT ATTCAAAGCA
AAACCCACCG GATTTATTCC TACAGAAGAT GAAGGTCGTT TGATTATTAC CTTTGAACTT
CCGGATGGAG CTTCTACAAC ACGTACGCTT GAAGTAATGA AAAAAATCAT GGCGGTTGTA
AAAGAAAACC CTTCTGTAAA TCACTTTGCT GCCTTAGGTG GTTTGAATGC GATTACCTTT
TCTTCAAAAT CAAATAGCGG AACCTTATTC TGCCAGCTAA AACCATGGGC ACAACGCAAA
GATGCTTCCA TGCAGGTAGA AGCAATCATC GGACAATTCC AGAAAGAATT TGCCGCCATT
AAAGAAGCTA ATATCATTGT TATTCCCCCA CCTCCTATTC CGGGTATGGG TACAGCTTCC
GGTTTCAGTT TTATGATTGA ACAGAAACAA AGCAACGATG ACATCAAAGG ATTTGAACGT
GTGGTAAAAC AATTTATGAT GGAAGCAAAC AAGCGTCCTG AAATTGCCCG TGCCTTTACA
TTCTTTACAG CACGTGCTCC GGGTTATAAA ATCAATGTTG ACAGGGTGAA GTGTGAACGT
ATGGGTGTAT CAACAGGCGA TGTGTTCTCC ACTATTCAGA CATTAATGGG TAGCCGCTAC
ATCAATGATT TCTCTATCTA TGGAAGAAAC TTCCGTGTTG TTACACAAGC GGATACTACA
TTCCGTAAAG ACATTACCAA TCTTGATAAA TATTATGTTC GTAATGTAAG CGGCAGCATG
ATTCCGTTAA GCTCACTGGC AACGTACGAA GCAGTTGAAA ACGCTCCGTT GATATCACAT
TATAACCTTT TCCGTTCTGC TGAATTCAAT GGTACACCTA AACCGGGTTA CAGCAGCGGT
GATGCTATTA AAGCACTGGA AGAAGTTGCA GCGCAGGTAT TGCCGGCAGG TTATGGATAT
GAGTTCTCGG GTTTAAGCAG AGAGGAAATC AAATCCGGAT CAAGTGCCGT TTATATCTTT
GCACTCTCTA TTGTGTTTGT ATTCTTATTC CTTGCAGCCT TGTATGAAAG CTGGTCTGTA
CCGTTCTCTG TTATGCTTGC GGTACCATTG GGTGCATTTG GTGCAATCCT TACACTTTAT
TTCTTACCTA AGTTAAGCAA TAACGTATAT GCCCAGATTG GCTTAATTAC GTTGATTGGT
CTGGCTGCAA AAAATGCAAT TCTTATTGTT GAATTCGCAA AAGAACGTGT GGACAAAGGA
ATGGAAATTG TTGCAGCAAC CATCGAAGCG GTGCAATTAC GTTTACGACC TATTCTTATG
ACATCGCTTG CCTTTATTCT TGGTGTATTA CCTTTAGTTG TTGCATCCGG AGCAGGAGCT
GTTTCCAGAC AAACGATCGG CTGGACGGTA TTTGGCGGTA TGCTTGCAGC AACAGGTCTG
GCAATATTTA TTGTTCCTGT ATTATATGTA TTGATCGCAA AGGTCGCCTA TCGCAATCAT
AAGCCTGAAA ACAATACAAC TGAATCAGAC AAACCTGCTT CTATCCATTA A
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| Protein sequence | MIADVFIKRP VTAIVVSVVI TLVGTLTLMN LPISQYPDIT PPIVQVTGNF AGADAQTVER
TIATPIEAQV NGSPGMSFLQ TNSTSDGTMT MNVTFDVGTN IDIATLDVQN RVSVATPQLP
DDVKKTGLTV RKRNPTILML VAMYSPNGTH DVKFMDNYTN IYIKDALLRV KGVGDIFTRA
DNFSMRIWMN PDKLAQYGMT ANEVVAKLQQ QNVQVAAGSI GSSPQTPDQA FEYSIQVNGM
LEKATDFENI VVRTKPDEGS IVYLKDVARV ELGKFNYSSN NFVDGKRSSY LLVYQSPGSN
ALETAEGVYK AMEELKKSFP NDVEYVVPFE SVSVVDVSID EVVHTLVEAL LLVIVVVFLF
LQSWRATLIP ILAIPVSIIG TFIFFIPLGF TVNTLTLFGF VLAIGIVVDD AIVVVEATQH
YIDHEKLSPK EATIKAMKDI SGPVIAIALI LAAVFVPVGF IPGIVGRLYQ QFAITIAVSV
LLSAFVALSL TPALCAMLLR PMHLDENSRG LNKFFFKFNN WFARVTASYS NGVKYCIRKA
PIAIILLICI FVATFGLFKA KPTGFIPTED EGRLIITFEL PDGASTTRTL EVMKKIMAVV
KENPSVNHFA ALGGLNAITF SSKSNSGTLF CQLKPWAQRK DASMQVEAII GQFQKEFAAI
KEANIIVIPP PPIPGMGTAS GFSFMIEQKQ SNDDIKGFER VVKQFMMEAN KRPEIARAFT
FFTARAPGYK INVDRVKCER MGVSTGDVFS TIQTLMGSRY INDFSIYGRN FRVVTQADTT
FRKDITNLDK YYVRNVSGSM IPLSSLATYE AVENAPLISH YNLFRSAEFN GTPKPGYSSG
DAIKALEEVA AQVLPAGYGY EFSGLSREEI KSGSSAVYIF ALSIVFVFLF LAALYESWSV
PFSVMLAVPL GAFGAILTLY FLPKLSNNVY AQIGLITLIG LAAKNAILIV EFAKERVDKG
MEIVAATIEA VQLRLRPILM TSLAFILGVL PLVVASGAGA VSRQTIGWTV FGGMLAATGL
AIFIVPVLYV LIAKVAYRNH KPENNTTESD KPASIH
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