Gene CHU_0923 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_0923 
Symbol 
ID4184111 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp1056837 
End bp1057613 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content39% 
IMG OID638070922 
Producthypothetical protein 
Protein accessionYP_677542 
Protein GI110637335 
COG category[S] Function unknown 
COG ID[COG2815] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.0499839 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTAT TTAAAGCAGA TTCATTAAAA AGTGTATTCA TTCATGCAGG AATTATAGTA 
AGTATTTTTG TAGGTTTAAT ACTCATCTTC TTTTACTGGT ATTTACCGTC TGTAACCAAG
CACGGAGAAT ACATCAGTGT ACCTAAATTA GAAGGCCTGT CGATCAGCCA GGTTGAACAG
AAATTAAATG ACCTGGGTTT GCGTTATGAA ATCAGTGATT CAACATTTAA GCCGGGTATT
ACACCATTAA CTGTTTTAAC ACAACATCCG CTGCCGGGCA ATGAAGTAAA AGAAAACAGA
AGGATCTATT TGAGTATTGC AGCTCAGCAC CCGCCCAATA TTAAAATGCC TAAACTGATT
GATGAATCTC CCAGAGGAGC TGAAATGATT CTTAAAAGCC TAGGTTTACA GATGGGCGAA
ATTAAAACAG CTCCACATCC ATACCCTACT GTTTTAGGGC AGTTTATAAA TGGTGCTCCC
GTAAAAGAAG GTACTTCTAT TCCCAAAGGC TCTAAAATTG ACCTGTTGGT AGGTACCGGC
AGAGGTGAAA CGGATGTTGA AATTCCCAAT TTGGTAAATA TGTCTTTAGA TGAGGCGAAA
TCCACCATCA GCAGTATGGG CCTGGTGGTT GGGCTTGTTA ATTATGATAC AAATTCAAAA
TTAGCAGAAG GAACAGTATG CAATCAAAAA CCTGCATACC AATCGGGGCA AAAACTTCGT
TCTGGAGATA TAATCGATCT TGTTGTAGCG GGAAGCGATC CGGTAATTCC TCAATAA
 
Protein sequence
MKLFKADSLK SVFIHAGIIV SIFVGLILIF FYWYLPSVTK HGEYISVPKL EGLSISQVEQ 
KLNDLGLRYE ISDSTFKPGI TPLTVLTQHP LPGNEVKENR RIYLSIAAQH PPNIKMPKLI
DESPRGAEMI LKSLGLQMGE IKTAPHPYPT VLGQFINGAP VKEGTSIPKG SKIDLLVGTG
RGETDVEIPN LVNMSLDEAK STISSMGLVV GLVNYDTNSK LAEGTVCNQK PAYQSGQKLR
SGDIIDLVVA GSDPVIPQ