Gene CHU_0922 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_0922 
Symbol 
ID4184110 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp1054628 
End bp1056820 
Gene Length2193 bp 
Protein Length730 aa 
Translation table11 
GC content37% 
IMG OID638070921 
Producthypothetical protein 
Protein accessionYP_677541 
Protein GI110637334 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0622402 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.970472 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAC TTTTTTTTCC GTGTCTGCTT TTTGTGTTGA TTGGTTCTAT GCCTGTATTG 
GCACAGGTAT CCATTGTACC ATTGACCCAA TATAATGTTG GTGAAACAGC TGAATATTCA
GCCTCCGATG CACGTACTGC AGCACTCACT CAAACAGATA CGTTAAAACT TCCCTATATT
GAAGATTTTT CAGGGCCACA ATTACCTATT GATACCATTA AAATAGTTGC CTTTACTTCA
ACAGAAAATA TATACGAGAT CAAACAATTA AAGCTTCATC CGCTGCTTAG CGGAGATAGT
ATCCGTATTT TAAATGCATT CGGAAGCGGG GAAAAATTTG ATACTACAGC TTATAATATT
TTAGGTAAAC GATTTGTAAA AGTTCTTGAT AAATATACCT TTCAGCTATT TAATGACAGG
CTTTTAACGG TTCCAACCAC TGTTAATGCT GACCCGTTAG CTCAGATGCA ATATTGCAAC
TGGTATAAAC TGGGTATTAA TGGCTACAGT ACAAAACCCG ATGTGTTAGG TTTTCTTGAC
GATAGCGGTG GTGTGTATAT TAATGACAAC ATGTCTTTAA ATCCTGTAAG CATCGGGGTT
GCCTCTTTTG ATGCGATAAA GTATACGGGA TTTCCGTATT CAAATGCTAA TGTTAACGGG
TATGCTGATA AATTAACCTC ATTGCCCTTT AATTTATCTT CCTATAAAGC AAAAGACTCT
GTTTATTTCA GCTTTTACTG GCAATCAAAA AGCTTCGGAG ATACACCGGA AAGTTCTGCC
TATTTAATTC TGGAATTTAA AAACCGCAAT AACGTATGGC AGGAAGTATG GCGTAAATAT
GGCGACCCGA CACAAACAAT TGATACCTTC CGTGTTGTTA ATATACCTTT AAAAGACACT
CTTTACCGGC ACAAAGGGTT TCAATACCGG TTCAGAAATT ATGGTTTGTT AAGCGGACGG
TTTAATGTGT GGAACATCGA TTACATTTAT ATCAATTCAA AACGCACGGT AAATGCAGCT
CAAACAGGAG ATCTGTGTAT TGTAAATACA AGCAGAAGTA TTCTTACGGA GTACACATCT
ATACCTTATA AACATTTCAT TTCATTGTCC TCATCTGATC AAGCAGATCT CATCAATCAG
GATCTTTTTT TCACATTAAG AGATTTAAGA TTTGGCGGCC CTGCCCTATC TTCTAAAAAC
AATCTTCTTG TCCGGGATAA TTTAGGCAAT ACTATTTCGA ATGATAATCA TGCTGATATA
ACTACGGGTG TTATATCAAG ATGGTCTTTC CCTTCTCCGG TATTAGATCC TCTAAAAATG
GATACTCCAT ATGTCGTAAA ACAAGAGTAT TCCTACAACA TTGTAGATTA TAAAGCTCCG
ATTGATTTAT CTTTCAATAA CTTTAAGGCC ATAGAAACAT ATTTCTACGA TTACTATGCC
TATGATGACG GCATACCGGA AGATGCATTT GAAGCATATC AGCGAAACGG TGAAGGAATC
TTATGCGCCA ATAAATTCGA CATTTTAAAA GAGGATTCGC TTACGCACAT AGACTTCTGC
TTTATCAAAA ACTTCGGCCC CAGTGTGGAA AACTCAATCA TTACAATGGC TGTTTGGAAA
GATGGAACAG CCATTGAAGA ACAACTAAGT CAGCAAATAA CCGTAAAATA CAGCACGATT
GTTAATGGAT TTGTACGTTA TGCAGTAACA CCTTCAGATA AAGCGAAGTT AGCTGCGGGC
ACCTATTATT TTGGTTTTAA ACATTTTATT GCCGGAAGCT TATTTGTAGG TTATGATAGA
AATAATGATA ACCTGGATAA AATAGTTACC AGCAGCAGTA CGAATACTAC CTGGACTGCT
TTCAATACAA ATGCGAATGC GTTAACAGGT ACGTTGATGA TAAGACCGGT ATTTAAAGGA
AAACCATTGC TTGTTACTGA TATTGAAGAT CAAGCAGCAT CCGAAACATC CAATACATTT
ATTCTTTATC CCAATCCGTC TGCCGGAGAG TTACATTTTA CCGGTGCACC TGAATATATA
TCGATTTATG ACTTAACGGG TAAATTAATT CAAACAACTC ATGTGAAAGA AACAGATTTG
CTTGATATTT CCGCGCTGAA CAATGGTTTA TATGTAGTAG TTCTGCAAAA GGCCGATTAT
TCAGAAACTA AACGTCTTGC CGTTCAAAAA TAA
 
Protein sequence
MKKLFFPCLL FVLIGSMPVL AQVSIVPLTQ YNVGETAEYS ASDARTAALT QTDTLKLPYI 
EDFSGPQLPI DTIKIVAFTS TENIYEIKQL KLHPLLSGDS IRILNAFGSG EKFDTTAYNI
LGKRFVKVLD KYTFQLFNDR LLTVPTTVNA DPLAQMQYCN WYKLGINGYS TKPDVLGFLD
DSGGVYINDN MSLNPVSIGV ASFDAIKYTG FPYSNANVNG YADKLTSLPF NLSSYKAKDS
VYFSFYWQSK SFGDTPESSA YLILEFKNRN NVWQEVWRKY GDPTQTIDTF RVVNIPLKDT
LYRHKGFQYR FRNYGLLSGR FNVWNIDYIY INSKRTVNAA QTGDLCIVNT SRSILTEYTS
IPYKHFISLS SSDQADLINQ DLFFTLRDLR FGGPALSSKN NLLVRDNLGN TISNDNHADI
TTGVISRWSF PSPVLDPLKM DTPYVVKQEY SYNIVDYKAP IDLSFNNFKA IETYFYDYYA
YDDGIPEDAF EAYQRNGEGI LCANKFDILK EDSLTHIDFC FIKNFGPSVE NSIITMAVWK
DGTAIEEQLS QQITVKYSTI VNGFVRYAVT PSDKAKLAAG TYYFGFKHFI AGSLFVGYDR
NNDNLDKIVT SSSTNTTWTA FNTNANALTG TLMIRPVFKG KPLLVTDIED QAASETSNTF
ILYPNPSAGE LHFTGAPEYI SIYDLTGKLI QTTHVKETDL LDISALNNGL YVVVLQKADY
SETKRLAVQK