| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_0912 |
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| Symbol | ycdQ |
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| ID | 4184101 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 1043144 |
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| End bp | 1044148 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638070913 |
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| Product | b-glycosyltransferase |
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| Protein accession | YP_677533 |
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| Protein GI | 110637326 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.780532 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.895852 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGGCG TAAGTGTGAT CATTTGTTGT TACAACAGTT CAGATAAATT ACCTGAAACA
TTATATCATA TAAGCCAGCA GCAACTAACA GCTGAACTGC CGGTAGAAGT AATCCTTGTT
GATAATGGAT CTACGGATAC TACATGTGCA GTAGCATCCG CATACTGGGA ACAAGTGAAA
GCGCCTTATC CATTACGTAT TATTTCCGAA ACAATACCGG GTAAAAACTA TGCCATTGAA
ACCGGCATTT CTGCCGCTGC ATATGATTTG ATTTTATTCT GCGATGACGA CAATTTATTA
TCTGCCGATT ATATTCAACG AGGTTATACG TATTTCTTAC AACATCCCGC ACTGGGTTTA
TTAGGCGGGT TCGGCATTCC TCGTCTCACA ATCGCACCGC CACCCTGGTT TGAACGGTAT
GCGTATCAAT ATGCACTAGG CCCTCAGCAC ACACGCGCTA GGAGGGATAT TACGCTTGAA
CGTGGATATG TATATGGAGC AGGAAGCATT CTGAAAAAAG AAGCGTATTT AACCCTGAAA
AAAAAAGGAT TTCAGTATAC CCTTACTGGC AGGAGAAATG GCATAATTAT TCCCGGGGAA
GACAATGAAC TTGGTTACGC CGTATCATTA ATCGGTTATC AAATTCATTC AAATCCGGAA
CTCACATTTA TACATGTACT TTCAGAAAGC CGGCTAACGT GGGCGTATAT AAAACGGTTA
AAAAAATCAG TGGCTTACAG TGCTGCTTTA TTAATTCCAT ATAAGGAGCG AAGAAACGAG
CGGCTGCTCA ATAAAAAAAG TACATTTAGC TGGACAAAAA AAATGCTGTC GGAATGTTTC
TATTTCTTAA ACGGATATGT GCGATACCCG TTTGCAGCAA CAGATTTTAA AACCGACATA
GTATTAGACA GGCAGGCACG TTTAGGAAGT ATACAAAGCC TGTTTGCCAA CAGGAAACTT
TTTATCAATA AACATTCCTG GTTGCCGTGG CTTCAGTCCA ATTAA
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| Protein sequence | MNGVSVIICC YNSSDKLPET LYHISQQQLT AELPVEVILV DNGSTDTTCA VASAYWEQVK
APYPLRIISE TIPGKNYAIE TGISAAAYDL ILFCDDDNLL SADYIQRGYT YFLQHPALGL
LGGFGIPRLT IAPPPWFERY AYQYALGPQH TRARRDITLE RGYVYGAGSI LKKEAYLTLK
KKGFQYTLTG RRNGIIIPGE DNELGYAVSL IGYQIHSNPE LTFIHVLSES RLTWAYIKRL
KKSVAYSAAL LIPYKERRNE RLLNKKSTFS WTKKMLSECF YFLNGYVRYP FAATDFKTDI
VLDRQARLGS IQSLFANRKL FINKHSWLPW LQSN
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