Gene CHU_0902 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_0902 
Symbol 
ID4186370 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp1031884 
End bp1033521 
Gene Length1638 bp 
Protein Length545 aa 
Translation table11 
GC content45% 
IMG OID638070902 
Producthypothetical protein 
Protein accessionYP_677523 
Protein GI110637316 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.440975 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAT CAATACCAGA GATCCGGTAC ACGCGTTTAT TTATGCTTTT TCAAAAATTG 
CACACGCGTC TGAACAGAAA CATTGATCAG GGCAAATTTA CCCAATTCAC ACAGAAGCAA
CGTACGCGTT TGCTGAATCG TCTGCACAAA ATTAAACTGC AGCTGCAGGT ATTTGCGCAG
GATGTTAAAT GGACAGGTTC TGCACTTGCC TTGAGTATCG CGTGTTATGC ATTTCCGGGA
CAAGCCCAGT TTCTTCCGGC AGGAGCAGAA TTCAAAGTAA ACAACGTAAC CACATGGGAC
CAGAAAAAAG CTTCAATTGC GATGGACGAC AATGGAGACT TTATTATTAC CTGGCAAAGC
GACTCAGATG AATATGGTTT CTATTACGAT ATTTATGGTC AGCGGTATAC TGCCGCCGGA
GCGGTACAGG GAAGTGCTTT TATGATCAAT GCGCCATCTT CAGAAGACCA GAGCCATCCA
TCCGTTGCAA TTAATCCCAA TGGTGGATTC ATCATTACGT ATGAACGCTA CCAGGTAGAC
AACCGGAATA TCTATGTACG CAGATACGAT GCTGCAGGTG CTTTGATAGG GTCAGAGATT
ATGGTGAGCA GCAATACAGA AGTGATTCAG AAAAACCCCG TAATTGCTAT TGATAGCGAC
GGGGATTTTG TGATCAGCTG GGATGCATAT CAGGATGGGG ATGGATTCGG GATCTATGCC
CGCAGGTATA ACGCCTCCGG AGTTGCACAG GGAGGCGAAT TCCAGGTGAA CACGTACACT
GCCGGACAAC AAAAAAACAC CGCCGTGGCT ATGGACGATG CAGGTAATTT TGTTATTACC
TGGCAAAGTG ATAAACAGGA TGGCGACTCC TATGGCGTTT ATGCACAGCG TTACAATGCG
GCAGGTGCAG CCCAGGGAAC AGAGTTCAGG GTAAATACAG TTACTGAAAA TCAACAGCAG
TATCCTGCTA TAGGTATGGA TAGTGATGGA GACTTTGCTA TTGTCTGGGA AACCGTTACC
GATTCCTACG ATGTATATGT GCAGCGGTAT AATGCAGCAG GTGTGCCACA GGGAACAGAA
TTTAATGCTA CCGCAGATCA ATTGTACGGA GGTAACCGTG CTTCAATAGC GATGGATAGC
GATGGAGATT TTGTACTCGC ATGGCAAACC TACCTGGACT ATGATCTGGA TATATATGCC
AAACGCTATA CGGCAGCAGG CGCAGCTGTT GGCAGCGAAA TAAAAGTAAA TACATTTACG
GACGGGTATC AGCAGAACCC GCATGTAGTA ATGGATAACA GCGGAGACAT CGTTGTGATC
TGGGAGAGTG AAGGTCAGGA TGGATCCGGA TATGGAATTT ATGGGCAGCG GTATACAGCA
GAGAATATAA CAACTGCTGC GCAAAAAAAG ACAGATGCTG TACTGTTCAA TATGTACCCT
AATCCGGCTA AAGGAGAAGT ATATCTTTCT GCCGGGGCCG GAGCTTATGT AAAAATTACT
GATCTGTCCG GACATGCAGT CAAAGAACAA TACCTTAACG GAAATAGAAT AGATATTGCT
GATCTCACAG CCGGAATGTA TGTAGTAACC ATCAACAGCG ACGGAAAGGA AGAAATAAAA
AAACTTATCG TAGAATAA
 
Protein sequence
MKKSIPEIRY TRLFMLFQKL HTRLNRNIDQ GKFTQFTQKQ RTRLLNRLHK IKLQLQVFAQ 
DVKWTGSALA LSIACYAFPG QAQFLPAGAE FKVNNVTTWD QKKASIAMDD NGDFIITWQS
DSDEYGFYYD IYGQRYTAAG AVQGSAFMIN APSSEDQSHP SVAINPNGGF IITYERYQVD
NRNIYVRRYD AAGALIGSEI MVSSNTEVIQ KNPVIAIDSD GDFVISWDAY QDGDGFGIYA
RRYNASGVAQ GGEFQVNTYT AGQQKNTAVA MDDAGNFVIT WQSDKQDGDS YGVYAQRYNA
AGAAQGTEFR VNTVTENQQQ YPAIGMDSDG DFAIVWETVT DSYDVYVQRY NAAGVPQGTE
FNATADQLYG GNRASIAMDS DGDFVLAWQT YLDYDLDIYA KRYTAAGAAV GSEIKVNTFT
DGYQQNPHVV MDNSGDIVVI WESEGQDGSG YGIYGQRYTA ENITTAAQKK TDAVLFNMYP
NPAKGEVYLS AGAGAYVKIT DLSGHAVKEQ YLNGNRIDIA DLTAGMYVVT INSDGKEEIK
KLIVE