| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_0900 |
|---|
| Symbol | |
|---|
| ID | 4186368 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cytophaga hutchinsonii ATCC 33406 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008255 |
|---|
| Strand | - |
|---|
| Start bp | 1028834 |
|---|
| End bp | 1029814 |
|---|
| Gene Length | 981 bp |
|---|
| Protein Length | 326 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 638070900 |
|---|
| Product | dTDP-glucose 4,6-dehydratase |
|---|
| Protein accession | YP_677521 |
|---|
| Protein GI | 110637314 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.425817 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTAAAA AAAGAGTACT TATCACCGGA GCGGCCGGTT TTTTAGGATC ACACTTATGT
GACCGTTTTA TTAAAGAAGG CTATCATGTA ATCGGGATGG ATAACCTTAT TACAGGAAAT
CTTAAAAATA TTGAACATTT ATTTCCGCTG GAAAATTTCG AATTTTATAA TCACGACGTT
TCCAAGTTTG TGCATGTTGC AGGTGATTTA GATTATATCC TTCATTTTGC ATCACCGGCA
AGTCCGATTG ACTATTTAAA GATTCCGATC CAGACCTTGA AAGTTGGTTC TTTGGGAACA
CATAATTTAC TGGGATTGGC GCGTGCTAAA AAAGCACGTA TGCTGATTGC TTCTACTTCT
GAAGTATATG GTGATCCGCT GATTCACCCA CAGACAGAAG ACTACTGGGG TAATGTAAAC
CCGATTGGTC CGCGTGGTGT ATACGATGAA GCAAAACGTT TTCAGGAAGC TATTACGATG
GCTTACCACA CGTATCATCA GGTAGAGACA CGTATTGTAC GTATCTTCAA TACCTATGGC
CCGAGAATGC GTCTCAATGA CGGACGTGTA TTGCCTGCAT TCATTGGCCA GGCGTTAAGA
GGAGAAGATC TTACTTCTTT TGGTGATGGT ACACAGACGC GTTCATTCTG TTATGTGAGT
GATCTGGTTG AAGGTATTTA CCGCTTATTG ATGAGTGATT ATGCGTATCC GGTAAACATC
GGGAATCCGG TAGAGATCAC CATCAACGAT TTTGCACAGG AAATCATTAA GCTTACCGGT
TCAAATGTAA AAATTACTTT TAAACCATTG CCTACAGATG ATCCCAAACA GCGCAAGCCG
GATATCACAA AAGCAAAAGA ACTATTAGGC TGGGAACCTA AGGTTTCCAG AGAAGAAGGT
TTGAAAATTA CCTACGACTA TTTCAAATCA CTTCCTAAGG AAGACTGGGA TGTCTTGCCA
AAAGAATTTA AAAAGAACTG A
|
|---|
| Protein sequence | MAKKRVLITG AAGFLGSHLC DRFIKEGYHV IGMDNLITGN LKNIEHLFPL ENFEFYNHDV
SKFVHVAGDL DYILHFASPA SPIDYLKIPI QTLKVGSLGT HNLLGLARAK KARMLIASTS
EVYGDPLIHP QTEDYWGNVN PIGPRGVYDE AKRFQEAITM AYHTYHQVET RIVRIFNTYG
PRMRLNDGRV LPAFIGQALR GEDLTSFGDG TQTRSFCYVS DLVEGIYRLL MSDYAYPVNI
GNPVEITIND FAQEIIKLTG SNVKITFKPL PTDDPKQRKP DITKAKELLG WEPKVSREEG
LKITYDYFKS LPKEDWDVLP KEFKKN
|
|---|
| |