Gene CHU_0896 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_0896 
Symbol 
ID4186364 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp1024508 
End bp1025299 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content36% 
IMG OID638070896 
Productb-glycosyltransferase 
Protein accessionYP_677517 
Protein GI110637310 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.000325648 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAATC TTACTGTATT AATCATTACG TATAATGAAG ACCCGAATAT TCATCGGGTG 
CTGGAAAAGC TGCGTTGGGC TGAAAAAATA GTGTTGCTCG ATAGCGGAAG TACAGATGAA
ACATTGTCTA TAGCCGGTAC ATTTTCAAAC GTAGAGGTTG TTTACAGAAA ATTTGATTCT
TTTGCTGAAC AATGCAATTT TGGGTTAAGT CTGATAAAAA CAGAATGGGT GTTGTCTCTT
GATGCAGATT ATGTATTAAC GGAGCCATTA ATTGCAGAAA TAAAGCATGC TGTTACTGAC
ACAACAGTGG ATGCCTGGAA CGTATGTTTT CGCTTTTGTG TATATGGATA TCCGCTACGT
TCAGATAACA CAACACCCAG GCCAATACTA TTTCGTACAT TGAAAGGTAA TTATTATAAT
GATGGTCACG CACACAGACT TGCCGTTCAG GGCAAGGAAA GTAATTTTAA AAATAAAATT
TTACATGATG ATCGTAAAGA TCTGAGTCGC TGGTTTAAAA ACCAGGATAG TTACGCTCTA
AAGGAGTGTC AGAAGCTTAT TCAAAAACCA TACGAGGAAC TACGCCCTAT TGATAAGATC
CGAAAATTGA AATGGATTGC ACCGTTTATG GTGTTCTTTT ATTCTCTATT TATAAAAGGG
TTAATTCTTG ATGGTTGGCA CGGGTGGTAT TATACATTAC AACGTACCAT GGTAGAAATT
ATGTTTACGC TGCGTTTAAT TGAAGCAGAA AAAATTAATA AGCAAGCAAA AGAATACGCT
AAGACAAAAT AG
 
Protein sequence
MNNLTVLIIT YNEDPNIHRV LEKLRWAEKI VLLDSGSTDE TLSIAGTFSN VEVVYRKFDS 
FAEQCNFGLS LIKTEWVLSL DADYVLTEPL IAEIKHAVTD TTVDAWNVCF RFCVYGYPLR
SDNTTPRPIL FRTLKGNYYN DGHAHRLAVQ GKESNFKNKI LHDDRKDLSR WFKNQDSYAL
KECQKLIQKP YEELRPIDKI RKLKWIAPFM VFFYSLFIKG LILDGWHGWY YTLQRTMVEI
MFTLRLIEAE KINKQAKEYA KTK