Gene CHU_0892 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_0892 
Symbol 
ID4186360 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp1020080 
End bp1021099 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content34% 
IMG OID638070892 
Productacyltransferase family protein 
Protein accessionYP_677513 
Protein GI110637306 
COG category[I] Lipid transport and metabolism 
COG ID[COG1835] Predicted acyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.000392602 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGGATA GAATAGGGCC GGGTTATTTT AGATATTTCT TATGTATCGT TGTGGTTTTA 
TTTCATTCCA CAAACTACAT CGCACTGGGA GAATGGGCTG TTCACGTCTT TTTTATTCTG
AGTGGGTACT GGGTAGTAAA GATGTATAAG GAAAAATACA TACTGTTTAA ATATCCTGTT
TCTTCGTTTT TATCCAGCCG TTTATTAAGG CTGCTGCCCG TTTTTTATAT CAATGTAATA
CTCATGATTG CCGTGATTTG TTTTGTCAAA CAACAAAGCT TACATGAATA TATCCGTGTA
TTAAATCCGG ATGTACCGTT TGTGTTATCG CATATTTTTA TTTTGGGCTT ATGTACTACA
GGTATGATTA TTCCGCCATC CTGGTCGTTG GATATTGAAA TGCAGTTTTA TATAATTGTC
CCTGCACTTT TATTTGTGCT TGCAAAATTA CAAAACAGGA AAATAGTTTT TCTGTCTGTT
TTCTTTATTT TATTTAGCAT TCTTTATTTT CTTCATCAGA ATTTACATTT TCCTCCTTCA
ATTGCAAATT ACCTTTGCTT TTTTCTTGTT GGTGTTTTGT TGTACCAGAC AGATTACCAT
GCAAGTAAAA AAGTTGCTGC TTTAAGTATT TGCATCGCTG TTTTTTTAGT TGCTCTAACC
TATATTATTC CGCATCTGTT TGAAAATGTT GTGCAGTCAA ACAAACTTAA AGTAGGAGGC
ATCTTATTCC GAATTATATT CGACTATCTA CTGGCACTTA TCATTATCCC TTTTATTTCA
AGAAACATTA GAAATAGAGG AGGAAGATGG GATAGGGATC TTGCTAATTT ATCTTATATA
ACCTATTTGT TTCATCGTGT AACCATGTAT CCATGGGGAT ACTACTATGG TAACGTGTCT
TTTGCCGAAC GTTTACCCTC CTTTGTAGTA TACTTGATTG CTACTTTTAT AGGCTCACTG
ATTATTTATT ATCTGGTTGA TATACCATTT GAAAAACTGC GAAAGAAATG GGTGGCGTAA
 
Protein sequence
MLDRIGPGYF RYFLCIVVVL FHSTNYIALG EWAVHVFFIL SGYWVVKMYK EKYILFKYPV 
SSFLSSRLLR LLPVFYINVI LMIAVICFVK QQSLHEYIRV LNPDVPFVLS HIFILGLCTT
GMIIPPSWSL DIEMQFYIIV PALLFVLAKL QNRKIVFLSV FFILFSILYF LHQNLHFPPS
IANYLCFFLV GVLLYQTDYH ASKKVAALSI CIAVFLVALT YIIPHLFENV VQSNKLKVGG
ILFRIIFDYL LALIIIPFIS RNIRNRGGRW DRDLANLSYI TYLFHRVTMY PWGYYYGNVS
FAERLPSFVV YLIATFIGSL IIYYLVDIPF EKLRKKWVA