Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_0891 |
Symbol | |
ID | 4185243 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 1018753 |
End bp | 1020090 |
Gene Length | 1338 bp |
Protein Length | 445 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 638070891 |
Product | hypothetical protein |
Protein accession | YP_677512 |
Protein GI | 110637305 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.00505222 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAGTATAT CTGCAGACAT AGTCGATTTG AATAAAGATG ATCGTTTTGT TAATAATATT AACAAAGCAA TCATGGTTTT CTATGTTTTA TTATTTCTGG AAGGTATTTT ACGAAAATGG ATCTTGCCTC AATTGAGTTC TCCGATTTTT TTTATCAAGG ATCCTGTATT GGTTTATATG TATATAATGT GCTGGAGTCA GGACAAATTT CCTAAGTCTG TTTTGTTTCA GGTTTCCATG ATGCTGGCTG TTATTTTTTT AATTCTAACA TTTATTCAAT TAGTAATGTA TACTTCCCCT TTTATTGCTG GGTTGTATGG ATGGCGCAAT TATTTTTTTT ATATGCCGCT GGCATTTATT ATGGAACACT ATATGAGAAA GCCAGACCTT ATTCGGTTTG CACGTTTTAC GTGTTATATA GGTATCCCAA TTGCAGTATT AACATATTTT CAATTTTTAA GTCCGCCAGA TGCATTCATC AATAGAAATG CCGGAGAAGA TGGGGGAGTT GGCTTTGCTG TATTTGGAGA TATTGTTCGT CCCTATGGGC CGTTCTCTTT TGTTTCAGGG ATGGTTTTTT TTACACCAAG TCTATTTTGT TTTTTGATGC TCAATTATTT TCTTCCTAAA GAAGAAAAAT TTTTATCCAT GTTTTGGTTT ATTATTTGTT TAGGTGCTTT TGCATCAAAT CTGGCAGTAA GCGGTTCAAG AGGAACATAT GGAAATGTTT TCGTATTATT TGCTTCACTG CTTTGTAGTT TACTTTTGTT GATACGGCAT AAAAAAATAC TGAAATCTCT TTTAATTATT ATTATTTCAG CATGCCTGGG ATTACTTATT TATAAAGTTG TTTTTGCAAG GCAGATTGAG ATTATCAGTC AACGTGTTGA AAATGCAAAA GGCGAATCAG TAGGTCACAG AGTTACTTCC GGTTTTGTTG CATTCAACGA AATTGATCCT GATTTAAACT TTTGGGGAGA AGGGATTGGG AAAGGTTCTG CGGGCACAGC TTATCTAACT ACAGGTAAAG CAGTATTCTC AATCGCTGAA TCAGATTGGG GAAGAAATGT GGTAGAATGC GGAGTGTTTT TCGGTTTTTT ATTTATCATA TACCGGATAA TACTTTGCTT ATATATGCTT TTCGGAGGTT TAGTAGCTAC CTTGAATTCT GCGGTACCCA TTCCGTTATT ATTTGTTGGC TATGAAATTC AAAATTTGTT TTTCGGACAG ATGGTTTCTG TAGGTACCAA TCTATCCTAT GGATGGCTAT TTCTAGGCAT TTCTCTTGCA ATAAATAAAA TATATAACAA CCAAACAGAA GAAACTAATG TTGGATAG
|
Protein sequence | MSISADIVDL NKDDRFVNNI NKAIMVFYVL LFLEGILRKW ILPQLSSPIF FIKDPVLVYM YIMCWSQDKF PKSVLFQVSM MLAVIFLILT FIQLVMYTSP FIAGLYGWRN YFFYMPLAFI MEHYMRKPDL IRFARFTCYI GIPIAVLTYF QFLSPPDAFI NRNAGEDGGV GFAVFGDIVR PYGPFSFVSG MVFFTPSLFC FLMLNYFLPK EEKFLSMFWF IICLGAFASN LAVSGSRGTY GNVFVLFASL LCSLLLLIRH KKILKSLLII IISACLGLLI YKVVFARQIE IISQRVENAK GESVGHRVTS GFVAFNEIDP DLNFWGEGIG KGSAGTAYLT TGKAVFSIAE SDWGRNVVEC GVFFGFLFII YRIILCLYML FGGLVATLNS AVPIPLLFVG YEIQNLFFGQ MVSVGTNLSY GWLFLGISLA INKIYNNQTE ETNVG
|
| |