Gene CHU_0884 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_0884 
Symbol 
ID4185236 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp1010970 
End bp1011821 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content37% 
IMG OID638070884 
Productb-glycosyltransferase 
Protein accessionYP_677505 
Protein GI110637298 
COG category[R] General function prediction only 
COG ID[COG1216] Predicted glycosyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.030368 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCTTT CAGTTATTAT ACCCACTTGC AACCGTTCTA ATCTGTTGAT CCATTGTTTG 
TCTGCATTAT ATGTTAATGT TTTGTCTATA AACAACCGGT TTGAATGTGA AGTTATTGTA
ACGGACGATA GCTCTGATGA AGAAACAAAA ACGCTTATAC AACAGCAGTA CACTTGGGTG
AAATGGGTTA AAGGACCGCG AAAAGGACCT GCTGCTAACA GAAATAACGG AGTTAAAAAT
GCTGATGGTG ACTGGTATCT GTTTATAGAT GATGATTGTT TGCCTGATAC AGAAATTTTA
ACTGAATACT ACAATGCAAT ATCGGCGAAT CCTGAAATGC GTGCATTTGA AGGGCGAATT
TATGTAGACG GTCCTAAAAA ATCGTTTCTG CATGAATCAC CCATAAATGA AACCGGAGGT
TTTTTCTGGT CATGCAATAT CTGTATTCAA AAGGATTTAT TTTACCAGTT AAAAGGCTTT
GATGAGCAGT TTCCTTTTGC TGCTATGGAA GATGTTGATT TGTTCAGACG GTTGAGACAG
ATAACGGACA AGCATGCATT TTTATTTAAC GCTTCCGTTG TGCATCCATG GAGATTGAAT
CGCAATCTTA TAAAGACAAC ATTGAAAAGA CACGCTTCAC AAGAATATTA TATACAAAAA
CATCCTGAAG AAGCCAAGAG ACTGAATGCA ATGCGCCATT TTCGATATTT TGTAAAAAAT
AATCTGTACT TGGTTACACA TGCCTGGAAA TACCGTTTTT CCGGCTTTGG TACGTTATTG
TATTGTAATT TCCTGCAATT GTATTTCTGT TTTAAAACGC TGTTAAAATC GCGCCCGGAC
AAAGCTTCTT AA
 
Protein sequence
MKLSVIIPTC NRSNLLIHCL SALYVNVLSI NNRFECEVIV TDDSSDEETK TLIQQQYTWV 
KWVKGPRKGP AANRNNGVKN ADGDWYLFID DDCLPDTEIL TEYYNAISAN PEMRAFEGRI
YVDGPKKSFL HESPINETGG FFWSCNICIQ KDLFYQLKGF DEQFPFAAME DVDLFRRLRQ
ITDKHAFLFN ASVVHPWRLN RNLIKTTLKR HASQEYYIQK HPEEAKRLNA MRHFRYFVKN
NLYLVTHAWK YRFSGFGTLL YCNFLQLYFC FKTLLKSRPD KAS