Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_0884 |
Symbol | |
ID | 4185236 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 1010970 |
End bp | 1011821 |
Gene Length | 852 bp |
Protein Length | 283 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 638070884 |
Product | b-glycosyltransferase |
Protein accession | YP_677505 |
Protein GI | 110637298 |
COG category | [R] General function prediction only |
COG ID | [COG1216] Predicted glycosyltransferases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.030368 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCTTT CAGTTATTAT ACCCACTTGC AACCGTTCTA ATCTGTTGAT CCATTGTTTG TCTGCATTAT ATGTTAATGT TTTGTCTATA AACAACCGGT TTGAATGTGA AGTTATTGTA ACGGACGATA GCTCTGATGA AGAAACAAAA ACGCTTATAC AACAGCAGTA CACTTGGGTG AAATGGGTTA AAGGACCGCG AAAAGGACCT GCTGCTAACA GAAATAACGG AGTTAAAAAT GCTGATGGTG ACTGGTATCT GTTTATAGAT GATGATTGTT TGCCTGATAC AGAAATTTTA ACTGAATACT ACAATGCAAT ATCGGCGAAT CCTGAAATGC GTGCATTTGA AGGGCGAATT TATGTAGACG GTCCTAAAAA ATCGTTTCTG CATGAATCAC CCATAAATGA AACCGGAGGT TTTTTCTGGT CATGCAATAT CTGTATTCAA AAGGATTTAT TTTACCAGTT AAAAGGCTTT GATGAGCAGT TTCCTTTTGC TGCTATGGAA GATGTTGATT TGTTCAGACG GTTGAGACAG ATAACGGACA AGCATGCATT TTTATTTAAC GCTTCCGTTG TGCATCCATG GAGATTGAAT CGCAATCTTA TAAAGACAAC ATTGAAAAGA CACGCTTCAC AAGAATATTA TATACAAAAA CATCCTGAAG AAGCCAAGAG ACTGAATGCA ATGCGCCATT TTCGATATTT TGTAAAAAAT AATCTGTACT TGGTTACACA TGCCTGGAAA TACCGTTTTT CCGGCTTTGG TACGTTATTG TATTGTAATT TCCTGCAATT GTATTTCTGT TTTAAAACGC TGTTAAAATC GCGCCCGGAC AAAGCTTCTT AA
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Protein sequence | MKLSVIIPTC NRSNLLIHCL SALYVNVLSI NNRFECEVIV TDDSSDEETK TLIQQQYTWV KWVKGPRKGP AANRNNGVKN ADGDWYLFID DDCLPDTEIL TEYYNAISAN PEMRAFEGRI YVDGPKKSFL HESPINETGG FFWSCNICIQ KDLFYQLKGF DEQFPFAAME DVDLFRRLRQ ITDKHAFLFN ASVVHPWRLN RNLIKTTLKR HASQEYYIQK HPEEAKRLNA MRHFRYFVKN NLYLVTHAWK YRFSGFGTLL YCNFLQLYFC FKTLLKSRPD KAS
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