Gene CHU_0883 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_0883 
Symbol 
ID4185235 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp1010466 
End bp1010957 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content38% 
IMG OID638070883 
Producthexapeptide repeat-containing protein acetyltransferase 
Protein accessionYP_677504 
Protein GI110637297 
COG category[R] General function prediction only 
COG ID[COG0110] Acetyltransferase (isoleucine patch superfamily) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.00414991 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTATTC TTACAAAATT ATATTTGAAA TTTGAAGCTA CAATGAATGC ACAACGCAGA 
CTTGCACTCA AAAAAAGACT GAAATTTTGT GGGGATAATG TGTCCATTGA CCCGACCAGT
ACCATAATGG TGCCTGGTAA AATGACCATC GGCCACAATA GTATGATATC GTGTTATACT
ACTATATATG CAACCTTCGG TGTTGAGATC GGTAACAATT CTATGATTTC CAGTAATTGC
GGAATTTCCT CCTATGGGCA TAAGCAACAT TCATTAAACA GGCAGGCCGA CGTTGCTGAG
GATGTTAATT TTTCGAAGCC GGTGATTATT GGAAATAATG TTTGGGTAGG AATGAATGCA
TGTATTTTGC CTGGTGTTTG TATTGGAGAT AATTCAATTG TAGGTTCAGG TAGCGTGGTT
ACTAAAAATG TACCTGCTAA TGAAGTTTGG GCAGGTAATC CAGCCCGGTT TATAAAAAAA
CTTGATCTTT AA
 
Protein sequence
MGILTKLYLK FEATMNAQRR LALKKRLKFC GDNVSIDPTS TIMVPGKMTI GHNSMISCYT 
TIYATFGVEI GNNSMISSNC GISSYGHKQH SLNRQADVAE DVNFSKPVII GNNVWVGMNA
CILPGVCIGD NSIVGSGSVV TKNVPANEVW AGNPARFIKK LDL