Gene CHU_0880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_0880 
Symbolwzc 
ID4185232 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp1005777 
End bp1008137 
Gene Length2361 bp 
Protein Length786 aa 
Translation table11 
GC content36% 
IMG OID638070880 
Producttyrosine-protein kinase 
Protein accessionYP_677501 
Protein GI110637294 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG0489] ATPases involved in chromosome partitioning 
TIGRFAM ID[TIGR01007] capsular exopolysaccharide family 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.107004 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAAGA AAGAAAATAA TACCATAGAT TTTAAAGGGA TTATACAAAA GCTACTATCC 
TACTGGATGT TTTTTCTGGT TTCTGTAAGT ATCTGTTATA TAGCGGCACG GGTTTATTTA
CATTATACTA CTGCTACATA CAGGGCAGCT ACCACAATTT TGATCAAAGA TGATACAAAA
TCATTAGGGC TTGAAGAATC ATCGTTATTT AATGAGAACA AAAAGGTAGG GAATGAATTG
GCGCTTATAA AATCCTATGA TCTTGTTGAA AAGACGATCA ATCAGTTGGA TTTTGATGTT
TCTTATTATC ATAAAGGTGA TATTAAAGAC GTAGAGCTGT ATCACAAAAA TCCGTTTACG
GTATTACTGG ATTCTGGTGC ACACCATCAC GGTCCTATCT ACATCGATTT CAAATCGCCT
ACAACGTTTC AATTGCGAAT AGGGGAAAAA AACGTAATCA ACGAAATCTA TGCCGTTAAT
ACGCCGATAC ATTCTAATGG GTTAAATTTT ACTATCGTAT GTGACTCATT GAACCAGCAC
CGCCCGGTAA ATTATAATGT ATATTTTATC ATTCATAAAC ATGAACAGCT GGTACAGCAA
TATACCAACT ACATGGGCAT TGCACGTGCA GGTAAAGAAG CACCCGGTAT TGTGGAACTT
TCTATAATGG GTACCGTGCC CGAAAAATTG GTAGCCTTTT TAAATACGCA TACACAAACG
TATATCAAAA GCGGTATTGA TGAAAAAAAC ATTACAGCTA TAAATACGAT ACGGTTTATT
GATGAACAAT TAGGAGAGGT TTCAAAATCA TTGAACTCTG CTGAAACGGA TTTAGAGTCT
TTCCGAAAAA AACATAAAGT GATGGACATC AGTTCATCGG CTGAAGGCAT CAAAGCAAAC
CTGGATGATC TGGAAAAACA AAAATCCATG GAGCTGCTCA AAGCCAAATA TTACGAATAC
CTCTATGCGT ATCTGAGACA GGATAAAAAC TTAAGTGAAG TTATTGCCCC GCATGTAATG
GGCATCGACG ATAATTTATT GACGGAGTTA ATCAGCGAGT TGATCGCATT GAATAATGAA
CGGAATGTAA TCATGCGTTC TTCCACTACC AAAAATCCTT ATTTAAAAGA ACTGGACGGC
AAGATTGCAC ATACAAAAGA AAGTTTGCTG GAAAGCATAC GGAATGTGAT CAGTACGGCT
CAGATTACGC TTAATGATCT TAACCAGCGC TTAGCCAAAT ATGAAACACA GTTATCTTTT
CTGCCGCAAA ACGAACGTAC GTTAGTTGAT ATTCAGAGAC GATTTAATTT AAATGACAAT
ATTTACAATT ATTTATTACA AAAACGTGCA GAATCCGGTA TTGCCAAAGC GTCAAACATT
GCGCAATGTA AAGTAGTAGA TGCCGCAAAA ATATTTAATG TAGGTATGGT TGGCCCCAAT
GGAAATCTTA TCCGTTCCCT TGCGCTGTTG ATCGGATTTT TGGTTCCTAT AGGTTTTATT
ATTGTACGCG AGGTTTTGAA TAATAAGGTC ATGACTAAAG ATGACGTTAT CCGCAATACC
AATATTCCTA TTTTAGGTGT AATCGGTAAT ACAAATACAA AAGAAAATAA TCTGGTTGTT
TTGAACAGAC CCAAATCAGC TATTTCTGAA GCATTCCGTT CTATCCGGAT TAACTTACAG
TACTTAGCGC CGGATAAAGA ACATAAAATA ATTCTGGTAA CATCTTCTGT AAGCGGAGAA
GGGAAAAGCT TTTTCTCTAC AAACTTAGCT TCCATAATGG CTTTGTCCGG CAAAAAAACA
TTGTTAATAG GTGCCGATTT ACGTAAGCCT AAACTCTTTA CTGATTTTGG ACTCGACAAT
ACTGTAGGTT TAAGTTCATG GCTCATAAAT GCCGTAAAAC TGGATGATGT TATTTTTAAA
ACACAACAGG AAAATTTATT TATTCTGCCT GCGGGTCCAA TCCCTCCTAA TCCAGCTGAA
CTGTTGTCTG CAGCAAAATT AGACGAATTA GCAGCAGCCG TTCAAAAAGA CTTCGATTAT
ATTATTGTGG ATACATCTCC GATCGGTCTT GTTTCGGATA GTCATATGCT GATGAAGTAT
TCTCATGTGA ATTTGTATAT TATCCGTCAT AGTGTAACTG AAATTAAATT GCTGGATCGT
TTAAACGATT TATACGAGGA GAAAAAAATA AAGAATCTTG CTATTGTTGT CAACGACCTG
AAAGAGAAAT CCGGCACATT CGGTTATGGT TACGGTTATG GTTACGGCTA TGGTTACGGT
TATGGCTATT ACGAAGAGGA TAAACGTAAC ACTTCTTTTT TAAAGAAATT TATCTCGAAA
TTGCCCTTCA GAAAAAAATA A
 
Protein sequence
MAKKENNTID FKGIIQKLLS YWMFFLVSVS ICYIAARVYL HYTTATYRAA TTILIKDDTK 
SLGLEESSLF NENKKVGNEL ALIKSYDLVE KTINQLDFDV SYYHKGDIKD VELYHKNPFT
VLLDSGAHHH GPIYIDFKSP TTFQLRIGEK NVINEIYAVN TPIHSNGLNF TIVCDSLNQH
RPVNYNVYFI IHKHEQLVQQ YTNYMGIARA GKEAPGIVEL SIMGTVPEKL VAFLNTHTQT
YIKSGIDEKN ITAINTIRFI DEQLGEVSKS LNSAETDLES FRKKHKVMDI SSSAEGIKAN
LDDLEKQKSM ELLKAKYYEY LYAYLRQDKN LSEVIAPHVM GIDDNLLTEL ISELIALNNE
RNVIMRSSTT KNPYLKELDG KIAHTKESLL ESIRNVISTA QITLNDLNQR LAKYETQLSF
LPQNERTLVD IQRRFNLNDN IYNYLLQKRA ESGIAKASNI AQCKVVDAAK IFNVGMVGPN
GNLIRSLALL IGFLVPIGFI IVREVLNNKV MTKDDVIRNT NIPILGVIGN TNTKENNLVV
LNRPKSAISE AFRSIRINLQ YLAPDKEHKI ILVTSSVSGE GKSFFSTNLA SIMALSGKKT
LLIGADLRKP KLFTDFGLDN TVGLSSWLIN AVKLDDVIFK TQQENLFILP AGPIPPNPAE
LLSAAKLDEL AAAVQKDFDY IIVDTSPIGL VSDSHMLMKY SHVNLYIIRH SVTEIKLLDR
LNDLYEEKKI KNLAIVVNDL KEKSGTFGYG YGYGYGYGYG YGYYEEDKRN TSFLKKFISK
LPFRKK