| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_0870 |
|---|
| Symbol | wcaL |
|---|
| ID | 4185224 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cytophaga hutchinsonii ATCC 33406 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008255 |
|---|
| Strand | + |
|---|
| Start bp | 995075 |
|---|
| End bp | 996160 |
|---|
| Gene Length | 1086 bp |
|---|
| Protein Length | 361 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 638070872 |
|---|
| Product | a-glycosyltransferase |
|---|
| Protein accession | YP_677493 |
|---|
| Protein GI | 110637286 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.179475 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.647303 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGTGT TGATGATAGG GCCTTTTCCT CCGGTTGTAA ATGGAGTTAC TGTAAGTAAT
GATTTTTTAT ATCATTCTTT AACAAGTCAA GGTGATCAGG TAAACCGTAT TAATACAGAA
ACCGGTAAAA TTGCCTCCAT GCAGGGAGAT AAAATAAGCC TCCATAAGAT CCTTACTTTT
TTATCTATTT ATAAAAATAT ATTCAAGGTT TCCGGAAAGG ATGTTGTGTA TATGACCATT
GGTCAGACAT TCTGGGGTGT TGTAAAATAT TCACCTTTTA TCTGTTATTG CTGGCTTGCA
GGTATTCCGT ACGTTTTTCA CATTCATGGG GGATATTTAA GTAAATCGTA CTTGAATATG
AGCCGCAGAA AACAACGTAT CATAAAAGTC TTATTCTCAA AAAGCAGTTG TGTAATAGCT
TTGTCTGAAT CGTTGGCAAA AGACATACAA AATATTTTTA CGAAAGTAAA TATAGCTGTT
GTCGAAAATT TTTACGATCA GGAATTGATT CATCCTGCCT TAGAGCGCAC AGTACATAGT
GTTCCTCATT TTTTATTTCT GAGTAATTTA ATGTTAGGCA AAGGCATTTT AGAATTTCTG
GATGCACTCA TTATTTTACA GGATGCTCAC AAACTTCATT TTAAGGTTGC GCTTGCAGGC
AATATTGAAA GAGGTATGCA AGCAGAAATA CAGAAAAGGA TTGACCGCTT AAAAGAAGAT
AAGGTATACT TTTTAGGATT AGCAGATTTG CCCAAGAAAA AGGAACTGCT GTATTGGTCT
GATATTTTCG TTTTGCCAAC CTGGTATATT ATGGAAGGGC AGCCAATAAG TATTATTGAA
GCATATGTTA CCGGAAATGT TGTTGTATCA ACACATCAGG GAGGTATTGA GGAAATCAGT
GGATACGATA CATTTTTCAA AACAGAAGCG CAGAACCCGG CGCTATTAGC AGAAGTACTG
TTTAACTCTG TGCAGCAACT GCCGCAGCTA AAGCAGGCTA TTGAACAGAC TAAAAAGACA
ACTCAAATAC GATTTAATTC TAACAGGTTT GTAGAAGAAA TTAAAGAAGT ACTGTTGAAA
AAATGA
|
|---|
| Protein sequence | MKVLMIGPFP PVVNGVTVSN DFLYHSLTSQ GDQVNRINTE TGKIASMQGD KISLHKILTF
LSIYKNIFKV SGKDVVYMTI GQTFWGVVKY SPFICYCWLA GIPYVFHIHG GYLSKSYLNM
SRRKQRIIKV LFSKSSCVIA LSESLAKDIQ NIFTKVNIAV VENFYDQELI HPALERTVHS
VPHFLFLSNL MLGKGILEFL DALIILQDAH KLHFKVALAG NIERGMQAEI QKRIDRLKED
KVYFLGLADL PKKKELLYWS DIFVLPTWYI MEGQPISIIE AYVTGNVVVS THQGGIEEIS
GYDTFFKTEA QNPALLAEVL FNSVQQLPQL KQAIEQTKKT TQIRFNSNRF VEEIKEVLLK
K
|
|---|
| |