Gene CHU_0862 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_0862 
Symbol 
ID4184221 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp984833 
End bp986107 
Gene Length1275 bp 
Protein Length424 aa 
Translation table11 
GC content39% 
IMG OID638070864 
ProductUDP-galactopyranose mutase 
Protein accessionYP_677485 
Protein GI110637278 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1232] Protoporphyrinogen oxidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.804118 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0706079 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAATA AAATTGCTGT TATTGGCTCA GGTATTTCAG GTTTGTCTGC TGCTGCGGTA 
TTAAACGATA CACATGACGT GCATGTATTT GAACGTAATG CAGCTATCGG AGGCCTTGTA
CATTGCGACC GTTCGGCAGA CGTATTGTAT CACCGCGTTG GAGGGCATGT ATTTAACAGC
AAAAACAAAG AAGTATTAGA ATGGTTCTGG AATAAATTTG ATAAAGAACA GGAATTTGTT
CAAGCCAAAC GCAATGCAAA GATTTTTTAT AAAGAAGGAT TTATTGGTTA TCCGATAGAA
AATTTTTTAT ATCAGCTTGA TCCATCTGTA GTAGAGCAGG TGATGAAAGA ATTGATAGAC
ATAAGCCAGG CCGGAGTAAA AGAACCTATG TCTTATGAGC ACTTTGAATC CTTTCTTCAG
AATACGTTTG GGCCAACGTT ATATGAATTG TATTTTAAAC CTTATAACAA CAAGATATGG
AAAACGGATC TGCGTACCGT ATCGATGCAG TGGCTGGAAG GTAAGTTGCC CATGCCGAAA
TTGATTGAAA TCATTACAAG TAACATCGTG CGCCGCGATG AAGCCGATAT GGTACATGCA
AATTTTTATT ATCCCAAATC AGGCGGTTCG CAGTTTATTG CTGACAGATT AGCAACAGGG
TTATCTGTTA CATGTAATAA AAAATTAGAA ACTATTGCAA TAAAAGAAAA TAAGCTGACT
GTTTTTGGCG AAGCATTTGA TCAGATCATT TATACGGCAG ATGTAAGAAA ACTGCCGGAT
ATATTGGCGT TACAAACAGA TCCTCCATTC CGGTATAACG AACAAATAAA AAAGCTTAGG
TCTAACGGTA CATCAAGTGT GTTGTGCAGC TGCGACAAAA GTGATTTGTC TTGGTTATAC
ATTCCCGAAG AACACTTCAA AGCGCATCGC ATTATCTACA CAGGCAATTT CAGTGCTACG
AATAATTCTG ACCTATTAAC AGACTCCAAT CGTTCTTCGT GCACCGTAGA ATTTTCAGGA
ATATGCAGCT ATGAAGAAAT GGTAGAAGAA CTTAGCTTAT TGCCCGGTAA TCTGCAGCCG
ATCGATTATA ACAACGAGCC TAATTCCTAT GTGATTCAGG ACAAAGAGAC GCGTAAAATT
ATTCAGGAAT ATAAAGAATA TTTAGCTCCA TACGGCATAC ATCTGTTAGG CCGCTTTGCT
GAATGGGAAT ATTATAATAT GGATAAGGCT ATGGAAGCAG CATTTGCGCT GAAACGGCAG
ATGCAGCCAG GTTAA
 
Protein sequence
MKNKIAVIGS GISGLSAAAV LNDTHDVHVF ERNAAIGGLV HCDRSADVLY HRVGGHVFNS 
KNKEVLEWFW NKFDKEQEFV QAKRNAKIFY KEGFIGYPIE NFLYQLDPSV VEQVMKELID
ISQAGVKEPM SYEHFESFLQ NTFGPTLYEL YFKPYNNKIW KTDLRTVSMQ WLEGKLPMPK
LIEIITSNIV RRDEADMVHA NFYYPKSGGS QFIADRLATG LSVTCNKKLE TIAIKENKLT
VFGEAFDQII YTADVRKLPD ILALQTDPPF RYNEQIKKLR SNGTSSVLCS CDKSDLSWLY
IPEEHFKAHR IIYTGNFSAT NNSDLLTDSN RSSCTVEFSG ICSYEEMVEE LSLLPGNLQP
IDYNNEPNSY VIQDKETRKI IQEYKEYLAP YGIHLLGRFA EWEYYNMDKA MEAAFALKRQ
MQPG