Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_0862 |
Symbol | |
ID | 4184221 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 984833 |
End bp | 986107 |
Gene Length | 1275 bp |
Protein Length | 424 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 638070864 |
Product | UDP-galactopyranose mutase |
Protein accession | YP_677485 |
Protein GI | 110637278 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1232] Protoporphyrinogen oxidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.804118 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0706079 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAATA AAATTGCTGT TATTGGCTCA GGTATTTCAG GTTTGTCTGC TGCTGCGGTA TTAAACGATA CACATGACGT GCATGTATTT GAACGTAATG CAGCTATCGG AGGCCTTGTA CATTGCGACC GTTCGGCAGA CGTATTGTAT CACCGCGTTG GAGGGCATGT ATTTAACAGC AAAAACAAAG AAGTATTAGA ATGGTTCTGG AATAAATTTG ATAAAGAACA GGAATTTGTT CAAGCCAAAC GCAATGCAAA GATTTTTTAT AAAGAAGGAT TTATTGGTTA TCCGATAGAA AATTTTTTAT ATCAGCTTGA TCCATCTGTA GTAGAGCAGG TGATGAAAGA ATTGATAGAC ATAAGCCAGG CCGGAGTAAA AGAACCTATG TCTTATGAGC ACTTTGAATC CTTTCTTCAG AATACGTTTG GGCCAACGTT ATATGAATTG TATTTTAAAC CTTATAACAA CAAGATATGG AAAACGGATC TGCGTACCGT ATCGATGCAG TGGCTGGAAG GTAAGTTGCC CATGCCGAAA TTGATTGAAA TCATTACAAG TAACATCGTG CGCCGCGATG AAGCCGATAT GGTACATGCA AATTTTTATT ATCCCAAATC AGGCGGTTCG CAGTTTATTG CTGACAGATT AGCAACAGGG TTATCTGTTA CATGTAATAA AAAATTAGAA ACTATTGCAA TAAAAGAAAA TAAGCTGACT GTTTTTGGCG AAGCATTTGA TCAGATCATT TATACGGCAG ATGTAAGAAA ACTGCCGGAT ATATTGGCGT TACAAACAGA TCCTCCATTC CGGTATAACG AACAAATAAA AAAGCTTAGG TCTAACGGTA CATCAAGTGT GTTGTGCAGC TGCGACAAAA GTGATTTGTC TTGGTTATAC ATTCCCGAAG AACACTTCAA AGCGCATCGC ATTATCTACA CAGGCAATTT CAGTGCTACG AATAATTCTG ACCTATTAAC AGACTCCAAT CGTTCTTCGT GCACCGTAGA ATTTTCAGGA ATATGCAGCT ATGAAGAAAT GGTAGAAGAA CTTAGCTTAT TGCCCGGTAA TCTGCAGCCG ATCGATTATA ACAACGAGCC TAATTCCTAT GTGATTCAGG ACAAAGAGAC GCGTAAAATT ATTCAGGAAT ATAAAGAATA TTTAGCTCCA TACGGCATAC ATCTGTTAGG CCGCTTTGCT GAATGGGAAT ATTATAATAT GGATAAGGCT ATGGAAGCAG CATTTGCGCT GAAACGGCAG ATGCAGCCAG GTTAA
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Protein sequence | MKNKIAVIGS GISGLSAAAV LNDTHDVHVF ERNAAIGGLV HCDRSADVLY HRVGGHVFNS KNKEVLEWFW NKFDKEQEFV QAKRNAKIFY KEGFIGYPIE NFLYQLDPSV VEQVMKELID ISQAGVKEPM SYEHFESFLQ NTFGPTLYEL YFKPYNNKIW KTDLRTVSMQ WLEGKLPMPK LIEIITSNIV RRDEADMVHA NFYYPKSGGS QFIADRLATG LSVTCNKKLE TIAIKENKLT VFGEAFDQII YTADVRKLPD ILALQTDPPF RYNEQIKKLR SNGTSSVLCS CDKSDLSWLY IPEEHFKAHR IIYTGNFSAT NNSDLLTDSN RSSCTVEFSG ICSYEEMVEE LSLLPGNLQP IDYNNEPNSY VIQDKETRKI IQEYKEYLAP YGIHLLGRFA EWEYYNMDKA MEAAFALKRQ MQPG
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