Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_0860 |
Symbol | |
ID | 4184219 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 982945 |
End bp | 983889 |
Gene Length | 945 bp |
Protein Length | 314 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 638070862 |
Product | b-glycosyltransferase |
Protein accession | YP_677483 |
Protein GI | 110637276 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0642732 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATATCT CAGTGATCAT ACCCATTAAA AACCGAGCGC ATCTGATTGC AGAGACGCTG GAAAGTATTT GGGCGCAATC GTTGCCGGCT GCAGAGGTCA TAATTGTAGA CGACGGTTCA ACAGATAATT TAAGAGATAT TCTTCAACCA TATGCTGACA AAATAATTTT TGTCAGCAGC AAAGGGCATG GTCCCGGAGC GGCACGGAAC ACAGGACTTG AAATTGCTAT AGGAGACGCA ATTCAGTTTT TTGATTCGGA TGATATTATG TCACCGAATA AATTAGAAGT ACAAGCAGCA CTACTCGGAG GAAATATAAA AACCGGTTGT GTGATCGGTC CATTTGTAGC GGCTAAAAAA GAGCAGCACA AATGGGTTCA GACAGATGTT ATTATGCAAT ATTTTCCAAT ACGCAATATG CCGTTTAATA ACATTGTAGC GCAAGGGTGG TGTTCCATTA CACAGGCGTG TTTGTTTTCA AGGTCATTGG TTGATCAGGT TGGTGCCTGG CGTGAAGATA TTATGACGCA TGAGGACAAA GAATATTGGT CACGTATAGC AATGCTTGTT CCCTTTCCCG TGCACGAAAA TAAAAGCCTC ACAATTTACC GGCAACATGA GCAGCAGATA ACAGATAAGC ATACAAAAGA ATTAGAACGT ACCCAAAATG GTATTGCCGT TTTTTCGGAG ATTTTAAAAC GAGATAAAAA GCAGCTGTCT TTATTAAGTA TCTTTGTACT GAAAGGTCTG ATTGCGAATT ATAAAAAATA TTGTAAACGC TATCAGGTAC ATTATCCGTT AACGCTGTCG GATCATCTCT CAGGAATCAT TAGCAAAGTA TATTCAAAAT ACGGGCGTGT TAAAACGGGT ACGGATTGGC AGCCCATACA TGGTGTCAAT GCAGATAAAA CAGTATTTCA AAAATATTTA AAACTATTTG TGTAG
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Protein sequence | MNISVIIPIK NRAHLIAETL ESIWAQSLPA AEVIIVDDGS TDNLRDILQP YADKIIFVSS KGHGPGAARN TGLEIAIGDA IQFFDSDDIM SPNKLEVQAA LLGGNIKTGC VIGPFVAAKK EQHKWVQTDV IMQYFPIRNM PFNNIVAQGW CSITQACLFS RSLVDQVGAW REDIMTHEDK EYWSRIAMLV PFPVHENKSL TIYRQHEQQI TDKHTKELER TQNGIAVFSE ILKRDKKQLS LLSIFVLKGL IANYKKYCKR YQVHYPLTLS DHLSGIISKV YSKYGRVKTG TDWQPIHGVN ADKTVFQKYL KLFV
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