Gene CHU_0860 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_0860 
Symbol 
ID4184219 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp982945 
End bp983889 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content40% 
IMG OID638070862 
Productb-glycosyltransferase 
Protein accessionYP_677483 
Protein GI110637276 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0642732 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATATCT CAGTGATCAT ACCCATTAAA AACCGAGCGC ATCTGATTGC AGAGACGCTG 
GAAAGTATTT GGGCGCAATC GTTGCCGGCT GCAGAGGTCA TAATTGTAGA CGACGGTTCA
ACAGATAATT TAAGAGATAT TCTTCAACCA TATGCTGACA AAATAATTTT TGTCAGCAGC
AAAGGGCATG GTCCCGGAGC GGCACGGAAC ACAGGACTTG AAATTGCTAT AGGAGACGCA
ATTCAGTTTT TTGATTCGGA TGATATTATG TCACCGAATA AATTAGAAGT ACAAGCAGCA
CTACTCGGAG GAAATATAAA AACCGGTTGT GTGATCGGTC CATTTGTAGC GGCTAAAAAA
GAGCAGCACA AATGGGTTCA GACAGATGTT ATTATGCAAT ATTTTCCAAT ACGCAATATG
CCGTTTAATA ACATTGTAGC GCAAGGGTGG TGTTCCATTA CACAGGCGTG TTTGTTTTCA
AGGTCATTGG TTGATCAGGT TGGTGCCTGG CGTGAAGATA TTATGACGCA TGAGGACAAA
GAATATTGGT CACGTATAGC AATGCTTGTT CCCTTTCCCG TGCACGAAAA TAAAAGCCTC
ACAATTTACC GGCAACATGA GCAGCAGATA ACAGATAAGC ATACAAAAGA ATTAGAACGT
ACCCAAAATG GTATTGCCGT TTTTTCGGAG ATTTTAAAAC GAGATAAAAA GCAGCTGTCT
TTATTAAGTA TCTTTGTACT GAAAGGTCTG ATTGCGAATT ATAAAAAATA TTGTAAACGC
TATCAGGTAC ATTATCCGTT AACGCTGTCG GATCATCTCT CAGGAATCAT TAGCAAAGTA
TATTCAAAAT ACGGGCGTGT TAAAACGGGT ACGGATTGGC AGCCCATACA TGGTGTCAAT
GCAGATAAAA CAGTATTTCA AAAATATTTA AAACTATTTG TGTAG
 
Protein sequence
MNISVIIPIK NRAHLIAETL ESIWAQSLPA AEVIIVDDGS TDNLRDILQP YADKIIFVSS 
KGHGPGAARN TGLEIAIGDA IQFFDSDDIM SPNKLEVQAA LLGGNIKTGC VIGPFVAAKK
EQHKWVQTDV IMQYFPIRNM PFNNIVAQGW CSITQACLFS RSLVDQVGAW REDIMTHEDK
EYWSRIAMLV PFPVHENKSL TIYRQHEQQI TDKHTKELER TQNGIAVFSE ILKRDKKQLS
LLSIFVLKGL IANYKKYCKR YQVHYPLTLS DHLSGIISKV YSKYGRVKTG TDWQPIHGVN
ADKTVFQKYL KLFV