| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_0857 |
|---|
| Symbol | |
|---|
| ID | 4184216 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cytophaga hutchinsonii ATCC 33406 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008255 |
|---|
| Strand | + |
|---|
| Start bp | 980217 |
|---|
| End bp | 981338 |
|---|
| Gene Length | 1122 bp |
|---|
| Protein Length | 373 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 638070859 |
|---|
| Product | a-glycosyltransferase |
|---|
| Protein accession | YP_677480 |
|---|
| Protein GI | 110637273 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.196284 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.0571713 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGTAT TGCATATTTT CCCATCAGCC TTTTTAGGCG GAAGCGAATT GTGCGCCATA
GAAAGTATTG AGTCTCTGCA AAAGACAGGT GTTGAGAATC ATGTCATTTT GCCGGCAGAA
GGAGCGGTTA TAAACCGGCT GGAAAATTTA TCCGTCTCGT ATAAAATTAT ACAACATAAT
TGGTGGATGT CTTCCAAACC ATGGAAGACG TATTTAAAAG TATTCATGCT GAAAGGGTTT
TATTCTTCAG CAGCATCAAT CAGAGAATAT ATTAAGAACA ATGGAATTGA TGTGGTGATT
ACACATTCTA TTGTTATCCC ATCAGGCGCT TTGGGCGCAA GGTTAACCAA TACGCCGCAT
GTTTGGTATC TGCATGAATA TGGTGATCTG GATCATCAGC TGAAATTTGA ATATGGCAAA
AGCTTTTCAC TGAATCTAAT CAATAAGCTG TCAAAGAAAA TAATTGTAAA TTCTGATGCA
CTAAAAAAGC ATTTTTCAAA AAAACTTCCT GCCGCTAAAA TAAACCGGTT GTATTATTCC
GTTAACTACC CTGAATTTAC ACCTTTGACG GAAAAGCCTT CGGGAGAATT GTTACTATGT
ATGGTTGGCC GTATTGCTAA AGGGAAGAAT CAATTGGTTG CTTTAAAAGC ATTGGCGCTT
TTGAAGCAAG AACAGATATT TCCGCAGCTT GTTTTTGTAG GAGGGGCAGA TCCGGATTAT
TTAAAACTAC TTGAAGCGTA TATTAAAACG CATGAACTGG AAAAACAAAT TGCATTTGCC
GGACAGACAG ATCGGCCATG GGATTTTGTG ATGAGGTCGC AGGCGGTTGT TGTAGGCAGT
GCGATGGAAG CCTTCGGCAG GGTTACTGTT GAAGCGATGA AAGCAGGGCG TATACCTATC
GTTTCTGATA CAGGCGCCGG ACCGGAATTA ATTACACACA ATGAAAACGG CTTTTTATTT
GATCCTGAAA AGGAAAAACA GCTTGCCGAA ATAATAAAAC AGATTTGGTT AGGAACTGAT
TTTACTGAAA TGACTGTTCA GGCAAAACAA TATGCCTTGG CACATTTTAA TTCAAAATTG
CATGGACATG AATTATTGAA AATTCTAACG GGGCTGGTAT GA
|
|---|
| Protein sequence | MKVLHIFPSA FLGGSELCAI ESIESLQKTG VENHVILPAE GAVINRLENL SVSYKIIQHN
WWMSSKPWKT YLKVFMLKGF YSSAASIREY IKNNGIDVVI THSIVIPSGA LGARLTNTPH
VWYLHEYGDL DHQLKFEYGK SFSLNLINKL SKKIIVNSDA LKKHFSKKLP AAKINRLYYS
VNYPEFTPLT EKPSGELLLC MVGRIAKGKN QLVALKALAL LKQEQIFPQL VFVGGADPDY
LKLLEAYIKT HELEKQIAFA GQTDRPWDFV MRSQAVVVGS AMEAFGRVTV EAMKAGRIPI
VSDTGAGPEL ITHNENGFLF DPEKEKQLAE IIKQIWLGTD FTEMTVQAKQ YALAHFNSKL
HGHELLKILT GLV
|
|---|
| |